Aliases for SNORA68 Gene

Subcategory (RNA class) for SNORA68 Gene

snoRNA

Quality Score for this RNA gene is

15

Aliases for SNORA68 Gene

  • Small Nucleolar RNA, H/ACA Box 68 2 3 5
  • RNA, U68 Small Nucleolar 2 3
  • SNORA68 2 176
  • U68 Small Nucleolar RNA 3
  • U68 SnoRNA 3
  • SNORA68A 3
  • RF00263 174
  • RNU68 3
  • U68 3

External Ids for SNORA68 Gene

Previous HGNC Symbols for SNORA68 Gene

  • RNU68

Previous GeneCards Identifiers for SNORA68 Gene

  • GC19P017837
  • GC19P017973
  • GC19P017538
  • GC19P017971
  • GC19P018176
  • GC19P020482
  • GC19P020625
  • GC19P018294
  • GC19P018328
  • GC19P018701
  • GC19P019011
  • GC19P019329
  • GC19P019665
  • GC19P020025
  • GC19P020340

Summaries for SNORA68 Gene

GeneCards Summary for SNORA68 Gene

SNORA68 (Small Nucleolar RNA, H/ACA Box 68) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA68 Gene

  • Small nucleolar RNA SNORA68

Additional gene information for SNORA68 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA68 Gene

Genomics for SNORA68 Gene

GeneHancer (GH) Regulatory Elements for SNORA68 Gene

Promoters and enhancers for SNORA68 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA68 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORA68 gene promoter:
  • AP-1
  • ATF-2
  • MyoD
  • NRSF form 1
  • NRSF form 2
  • Sp1
  • STAT5B

Genomic Locations for SNORA68 Gene

Genomic Locations for SNORA68 Gene
chr19:17,862,588-17,862,720
(GRCh38/hg38)
Size:
133 bases
Orientation:
Plus strand
chr19:17,973,397-17,973,529
(GRCh37/hg19)
Size:
133 bases
Orientation:
Plus strand

Genomic View for SNORA68 Gene

Genes around SNORA68 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA68 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA68 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA68 Gene

Proteins for SNORA68 Gene

Post-translational modifications for SNORA68 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA68 Gene

Domains & Families for SNORA68 Gene

Gene Families for SNORA68 Gene

genes like me logo Genes that share domains with SNORA68: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA68 Gene

Function for SNORA68 Gene

Phenotypes From GWAS Catalog for SNORA68 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA68 Gene

Localization for SNORA68 Gene

Gene Ontology (GO) - Cellular Components for SNORA68 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORA68: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORA68 Gene

Pathways & Interactions for SNORA68 Gene

PathCards logo

SuperPathways for SNORA68 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORA68 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORA68: view

No data available for Pathways by source and SIGNOR curated interactions for SNORA68 Gene

Drugs & Compounds for SNORA68 Gene

No Compound Related Data Available

Transcripts for SNORA68 Gene

mRNA/cDNA for SNORA68 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2297) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) ENA transcripts :
(1) Rfam transcripts :
(1) snOPY transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA68 Gene

No ASD Table

Relevant External Links for SNORA68 Gene

GeneLoc Exon Structure for
SNORA68
ECgene alternative splicing isoforms for
SNORA68

Expression for SNORA68 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORA68 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA68 Gene:

SNORA68

SOURCE GeneReport for Unigene cluster for SNORA68 Gene:

Hs.684118
genes like me logo Genes that share expression patterns with SNORA68: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA68 Gene

Orthologs for SNORA68 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA68 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA68 33
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA68 33
  • 86 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm22661 33
  • 74 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia SNORA68 33
  • 72 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA68 33 33 33
  • 68 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA68 33 33
  • 64 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA68 33
  • 62 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA68 33
  • 63 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA68 33 33
  • 61 (a)
ManyToMany
Species where no ortholog for SNORA68 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA68 Gene

ENSEMBL:
Gene Tree for SNORA68 (if available)
TreeFam:
Gene Tree for SNORA68 (if available)

Paralogs for SNORA68 Gene

No data available for Paralogs for SNORA68 Gene

Variants for SNORA68 Gene

Sequence variations from dbSNP and Humsavar for SNORA68 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000338719 -- 17,861,301(+) G/C upstream_transcript_variant
rs1001422649 -- 17,862,035(+) T/C upstream_transcript_variant
rs1001875539 -- 17,862,334(+) G/A upstream_transcript_variant
rs1001941410 -- 17,860,832(+) G/A upstream_transcript_variant
rs1003499292 -- 17,861,101(+) C/A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORA68 Gene

Variant ID Type Subtype PubMed ID
nsv833772 CNV gain+loss 17160897

Additional Variant Information for SNORA68 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA68

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA68 Gene

Disorders for SNORA68 Gene

Additional Disease Information for SNORA68

No disorders were found for SNORA68 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA68 Gene

Publications for SNORA68 Gene

  1. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. (PMID: 9182768) Ganot P … Kiss T (Cell 1997) 2 3 56
  2. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P … Kiss T (Genes & development 1997) 2 3 56
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 56

Products for SNORA68 Gene

Sources for SNORA68 Gene