Aliases for SNORA63 Gene

Subcategory (RNA class) for SNORA63 Gene

snoRNA

Number of RNA Genes sources:

3 / 14

Aliases for SNORA63 Gene

  • Small Nucleolar RNA, H/ACA Box 63 2 3 5
  • RNA, U107 Small Nucleolar 2 3
  • SNORA63 2 174
  • RNA, Small Nucleolar E3 3
  • SNORA63A 3
  • ElF-4AII 3
  • RF00092 172
  • RNU107 3
  • E3-2 3
  • RNE3 3
  • E3 3

External Ids for SNORA63 Gene

Previous HGNC Symbols for SNORA63 Gene

  • RNE3
  • RNU107

Previous GeneCards Identifiers for SNORA63 Gene

  • GC03P187995
  • GC03P187998
  • GC03P186500
  • GC03P186521
  • GC03P186527
  • GC03P186532
  • GC03P186538
  • GC03P186547
  • GC03P186555
  • GC03P186573
  • GC03P186790
  • GC03P186796
  • GC03P186843
  • GC03P186848
  • GC03P186855
  • GC03P186801
  • GC03P186806
  • GC03P186812
  • GC03P186817
  • GC03P186822
  • GC03P186829
  • GC03P186834
  • GC03P186838

Summaries for SNORA63 Gene

GeneCards Summary for SNORA63 Gene

SNORA63 (Small Nucleolar RNA, H/ACA Box 63) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA63 Gene

  • Small nucleolar RNA SNORA63

Additional gene information for SNORA63 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA63 Gene

Genomics for SNORA63 Gene

GeneHancer (GH) Regulatory Elements for SNORA63 Gene

Promoters and enhancers for SNORA63 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA63 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORA63 gene promoter:
  • E2F
  • Elk-1
  • Evi-1
  • Lmo2
  • Meis-1
  • Meis-1a
  • Meis-1b
  • SREBP-1b
  • SREBP-1c
  • STAT5A

Genomic Locations for SNORA63 Gene

Genomic Locations for SNORA63 Gene
chr3:186,787,299-186,787,433
(GRCh38/hg38)
Size:
135 bases
Orientation:
Plus strand
chr3:186,505,088-186,505,222
(GRCh37/hg19)
Size:
135 bases
Orientation:
Plus strand

Genomic View for SNORA63 Gene

Genes around SNORA63 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA63 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA63 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA63 Gene

Proteins for SNORA63 Gene

Post-translational modifications for SNORA63 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA63 Gene

Domains & Families for SNORA63 Gene

Gene Families for SNORA63 Gene

genes like me logo Genes that share domains with SNORA63: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA63 Gene

Function for SNORA63 Gene

Phenotypes From GWAS Catalog for SNORA63 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA63 Gene

Localization for SNORA63 Gene

Gene Ontology (GO) - Cellular Components for SNORA63 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0072588 box H/ACA RNP complex IDA 10757788
genes like me logo Genes that share ontologies with SNORA63: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORA63 Gene

Pathways & Interactions for SNORA63 Gene

PathCards logo

SuperPathways for SNORA63 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNORA63 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORA63 Gene

Drugs & Compounds for SNORA63 Gene

No Compound Related Data Available

Transcripts for SNORA63 Gene

mRNA/cDNA for SNORA63 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 ENA transcripts :
1 Rfam transcripts :
1 snOPY transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA63 Gene

No ASD Table

Relevant External Links for SNORA63 Gene

GeneLoc Exon Structure for
SNORA63

Expression for SNORA63 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA63 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SNORA63

genes like me logo Genes that share expression patterns with SNORA63: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA63 Gene

Orthologs for SNORA63 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA63 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA63 31
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA63 31
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA63 31
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26447 31
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORA63 31 31 31
  • 77 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA63 31
  • 58 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORA63 31
  • 77 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORA63 31
  • 75 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA63 31 31 31 31 31
  • 69 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORA63 31
  • 57 (a)
OneToMany
Species where no ortholog for SNORA63 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA63 Gene

ENSEMBL:
Gene Tree for SNORA63 (if available)
TreeFam:
Gene Tree for SNORA63 (if available)

Paralogs for SNORA63 Gene

No data available for Paralogs for SNORA63 Gene

Variants for SNORA63 Gene

Additional dbSNP identifiers (rs#s) for SNORA63 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA63 Gene

Variant ID Type Subtype PubMed ID
dgv5005n100 CNV gain 25217958
esv2759206 CNV loss 17122850
esv34136 CNV loss 18971310
esv3893839 CNV gain 25118596
nsv1012615 CNV gain 25217958

Additional Variant Information for SNORA63 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA63

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNORA63 Gene

Disorders for SNORA63 Gene

Additional Disease Information for SNORA63

No disorders were found for SNORA63 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA63 Gene

Publications for SNORA63 Gene

  1. Three small nucleolar RNAs of unique nucleotide sequences. (PMID: 8421699) Ruff EA … Eliceiri GL (Proceedings of the National Academy of Sciences of the United States of America 1993) 2 3 54
  2. TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions. (PMID: 27609421) Banks CA … Washburn MP (Molecular & cellular proteomics : MCP 2016) 3 54
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 54
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 54
  5. In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs. (PMID: 10757788) Dragon F … Filipowicz W (Molecular and cellular biology 2000) 3 54

Products for SNORA63 Gene

Sources for SNORA63 Gene