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Aliases for SNORA59B Gene

Subcategory (RNA class) for SNORA59B Gene


Quality Score for this RNA gene is


Aliases for SNORA59B Gene

  • Small Nucleolar RNA, H/ACA Box 59B 2 3 5
  • ACA59 3

External Ids for SNORA59B Gene

ORGUL Members for SNORA59B Gene

Previous GeneCards Identifiers for SNORA59B Gene

  • GC17P019402
  • GC17P019477
  • GC17P018840
  • GC17P019559
  • GC17P019592
  • GC17P019608
  • GC17P019621
  • GC17P019630
  • GC17P019637
  • GC17P019645

Summaries for SNORA59B Gene

GeneCards Summary for SNORA59B Gene

SNORA59B (Small Nucleolar RNA, H/ACA Box 59B) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SNORA59B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA59B Gene

Genomics for SNORA59B Gene

GeneHancer (GH) Regulatory Elements for SNORA59B Gene

Promoters and enhancers for SNORA59B Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I019718 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.8 +162.7 162713 3.7 ELF3 FOXA2 MLX ARID4B THRB ZNF48 RAD21 RARA ZNF143 FOS SLC47A2 ENSG00000262681 ALDH3A1 SNORA59B SLC47A1 ENSG00000252349 ENSG00000261033 ENSG00000264785
GH17I019762 Enhancer 0.9 Ensembl ENCODE 11.3 +205.5 205455 0.5 CTCF RAD21 ZNF335 ZFHX2 PATZ1 ZNF143 SMC3 PRDM10 ZNF600 THAP11 SNORA59B SLC47A1 ENSG00000252349 USP32P3 LOC441784 GC17M019770
GH17I019703 Enhancer 0.9 Ensembl ENCODE 10.9 +146.7 146704 1.1 SOX13 TFAP4 NFIA SAP130 SP5 NR2F1 HMG20A ZNF644 RAD21 RARA SLC47A1 ENSG00000252349 SNORA59B ENSG00000231625 GC17M019705 GC17M019707 SLC47A2
GH17I019520 Enhancer 0.7 Ensembl 12 -36.9 -36910 0.6 BCOR HDAC1 FOXA2 TAL1 ARID4B E4F1 TCF12 CTBP1 NCOR1 CBFA2T2 SLC47A1 SNORA59B ENSG00000252349 TRW-CCA2-1
GH17I019519 Enhancer 0.7 ENCODE 12 -37.6 -37580 0.7 HDAC1 BCOR FOXA2 TEAD4 TAL1 ARID4B TCF12 NCOR1 CBFA2T2 ZNF282 SLC47A1 SNORA59B ENSG00000252349 TRW-CCA2-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORA59B on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORA59B gene promoter:

Genomic Locations for SNORA59B Gene

Genomic Locations for SNORA59B Gene
701 bases
Plus strand

Genomic View for SNORA59B Gene

Genes around SNORA59B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA59B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA59B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA59B Gene

Proteins for SNORA59B Gene

Post-translational modifications for SNORA59B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA59B Gene

Domains & Families for SNORA59B Gene

Gene Families for SNORA59B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA59B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA59B Gene

Function for SNORA59B Gene

Phenotypes From GWAS Catalog for SNORA59B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA59B Gene

Localization for SNORA59B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA59B Gene

Pathways & Interactions for SNORA59B Gene

SuperPathways for SNORA59B Gene

No Data Available

Interacting Proteins for SNORA59B Gene

Gene Ontology (GO) - Biological Process for SNORA59B Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA59B Gene

Drugs & Compounds for SNORA59B Gene

No Compound Related Data Available

Transcripts for SNORA59B Gene

mRNA/cDNA for SNORA59B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA59B Gene

No ASD Table

Relevant External Links for SNORA59B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA59B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORA59B Gene

mRNA differential expression in normal tissues according to GTEx for SNORA59B Gene

This gene is overexpressed in Adrenal Gland (x9.7) and Liver (x8.1).

NURSA nuclear receptor signaling pathways regulating expression of SNORA59B Gene:

genes like me logo Genes that share expression patterns with SNORA59B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA59B Gene

Orthologs for SNORA59B Gene

Evolution for SNORA59B Gene

Gene Tree for SNORA59B (if available)
Gene Tree for SNORA59B (if available)

No data available for Orthologs for SNORA59B Gene

Paralogs for SNORA59B Gene

No data available for Paralogs for SNORA59B Gene

Variants for SNORA59B Gene

Sequence variations from dbSNP and Humsavar for SNORA59B Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1002986172 -- 19,557,214(+) A/G upstream_transcript_variant
rs1004903859 -- 19,556,271(+) A/G upstream_transcript_variant
rs1008855512 -- 19,558,138(+) A/G downstream_transcript_variant
rs1009016396 -- 19,557,227(+) T/A upstream_transcript_variant
rs1011625628 -- 19,556,299(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORA59B Gene

Variant ID Type Subtype PubMed ID
esv3582561 CNV loss 25503493
nsv1061317 CNV gain 25217958
nsv1061408 CNV gain 25217958
nsv428337 CNV loss 18775914
nsv517848 CNV gain 19592680

Additional Variant Information for SNORA59B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA59B Gene

Disorders for SNORA59B Gene

Additional Disease Information for SNORA59B

No disorders were found for SNORA59B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA59B Gene

Publications for SNORA59B Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 2 3 58
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 2 3 58
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORA59B Gene

Sources for SNORA59B Gene

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