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Aliases for SNORA44 Gene

Subcategory (RNA class) for SNORA44 Gene


Quality Score for this RNA gene is


Aliases for SNORA44 Gene

  • Small Nucleolar RNA, H/ACA Box 44 2 3 5
  • ACA44 SnoRNA 3
  • ACA44 3

External Ids for SNORA44 Gene

ORGUL Members for SNORA44 Gene

Previous GeneCards Identifiers for SNORA44 Gene

  • GC01M028779
  • GC01M028908
  • GC01M028911
  • GC01M028918
  • GC01M028582
  • GC01M028588
  • GC01M028591
  • GC01M028596
  • GC01M028598
  • GC01M028603
  • GC01M028605

Summaries for SNORA44 Gene

GeneCards Summary for SNORA44 Gene

SNORA44 (Small Nucleolar RNA, H/ACA Box 44) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORA44 include Wilson-Turner X-Linked Mental Retardation Syndrome.

Additional gene information for SNORA44 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA44 Gene

Genomics for SNORA44 Gene

GeneHancer (GH) Regulatory Elements for SNORA44 Gene

Promoters and enhancers for SNORA44 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I028578 Promoter/Enhancer 1.6 Ensembl ENCODE 550.8 -0.7 -688 4.5 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SNHG12 GC01M028584 GC01M028612 GC01M028618 GC01M028623 GC01M028624 GC01M028625 GC01M028628 PIR59489 SNORA16A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORA44 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORA44 gene promoter:

Genomic Locations for SNORA44 Gene

Genomic Locations for SNORA44 Gene
132 bases
Minus strand

Genomic View for SNORA44 Gene

Genes around SNORA44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA44 Gene

Proteins for SNORA44 Gene

Post-translational modifications for SNORA44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA44 Gene

Domains & Families for SNORA44 Gene

Gene Families for SNORA44 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA44: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA44 Gene

Function for SNORA44 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA44 Gene

Localization for SNORA44 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SNORA44 gene
Compartment Confidence
cytosol 2
plasma membrane 1
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA44 Gene

Pathways & Interactions for SNORA44 Gene

SuperPathways for SNORA44 Gene

No Data Available

Interacting Proteins for SNORA44 Gene

Gene Ontology (GO) - Biological Process for SNORA44 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA44 Gene

Drugs & Compounds for SNORA44 Gene

No Compound Related Data Available

Transcripts for SNORA44 Gene

mRNA/cDNA for SNORA44 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA44 Gene

No ASD Table

Relevant External Links for SNORA44 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA44 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA44 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA44 Gene

Orthologs for SNORA44 Gene

Evolution for SNORA44 Gene

Gene Tree for SNORA44 (if available)
Gene Tree for SNORA44 (if available)

No data available for Orthologs for SNORA44 Gene

Paralogs for SNORA44 Gene

No data available for Paralogs for SNORA44 Gene

Variants for SNORA44 Gene

Sequence variations from dbSNP and Humsavar for SNORA44 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000018185 -- 28,580,922(-) C/A/G/T upstream_transcript_variant
rs1002530182 -- 28,582,240(-) C/T upstream_transcript_variant
rs1002566049 -- 28,582,068(-) C/T upstream_transcript_variant
rs1002736529 -- 28,580,757(-) A/C upstream_transcript_variant
rs1003537312 -- 28,581,337(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORA44 Gene

Variant ID Type Subtype PubMed ID
nsv545916 CNV gain 21841781

Additional Variant Information for SNORA44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA44 Gene

Disorders for SNORA44 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNORA44 Gene - From: DISEASES

Disorder Aliases PubMed IDs
wilson-turner x-linked mental retardation syndrome
  • wts
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for SNORA44

genes like me logo Genes that share disorders with SNORA44: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNORA44 Gene

Publications for SNORA44 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 2 3 58
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 2 3 58
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORA44 Gene

Sources for SNORA44 Gene

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