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Aliases for SNORA36A Gene

Subcategory (RNA class) for SNORA36A Gene


Quality Score for this RNA gene is


Aliases for SNORA36A Gene

  • Small Nucleolar RNA, H/ACA Box 36A 2 3 5
  • ACA36 SnoRNA 3
  • ACA36 3

External Ids for SNORA36A Gene

Previous GeneCards Identifiers for SNORA36A Gene

  • GC0XP153649
  • GC0XP153996
  • GC0XP142540
  • GC0XP154769
  • GC0XP154772
  • GC0XP154773
  • GC0XP154776

Summaries for SNORA36A Gene

Entrez Gene Summary for SNORA36A Gene

  • Biosynthesis of stable cellular RNAs such as tRNAs, rRNAs, snRNAs, and snoRNAs is aided by covalent nucleotide modification after transcription. The modified nucleotides are involved in correct RNA folding, establishment of correct RNA-RNA and RNA-protein interactions, and in the correct function of mature RNAs. The RNA encoded by this gene is thought to mediate the pseudouridylation of residues U105 and U1244 of 18S rRNA. [provided by RefSeq, Feb 2009]

GeneCards Summary for SNORA36A Gene

SNORA36A (Small Nucleolar RNA, H/ACA Box 36A) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORA36A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORA36A Gene

Genomics for SNORA36A Gene

GeneHancer (GH) Regulatory Elements for SNORA36A Gene

Promoters and enhancers for SNORA36A Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI154796 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13.8 +32.9 32873 10.1 HDGF PKNOX1 SMAD1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 MPP1 F8A1 DKC1 SNORA56 F8A2 SNORA70 SNORA36A IKBKG TMLHE HCFC1
GH0XI154794 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 13.9 +26.6 26648 1.6 MITF SCRT1 ZNF664 POLR2A ZNF592 F8A1 SNORA36A DKC1 MPP1 SNORA56 F8A2 FAM3A IKBKG GAB3 EMD
GH0XI154826 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 13 +59.4 59413 2 SRF IRF2 POLR2A L3MBTL2 ZNF592 F8A1 F8A2 SNORA36A DKC1 IKBKG GAB3 EMD MPP1 DNASE1L1 TAZ
GH0XI154695 Enhancer 0.8 Ensembl ENCODE dbSUPER 12.6 -72.2 -72167 1.7 PKNOX1 CEBPG GAB3 DKC1 SNORA36A SNORA56 OR3B1P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORA36A on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORA36A gene promoter:

Genomic Locations for SNORA36A Gene

Genomic Locations for SNORA36A Gene
132 bases
Plus strand

Genomic View for SNORA36A Gene

Genes around SNORA36A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA36A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA36A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA36A Gene

Proteins for SNORA36A Gene

Post-translational modifications for SNORA36A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA36A Gene

Domains & Families for SNORA36A Gene

Gene Families for SNORA36A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORA36A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORA36A Gene

Function for SNORA36A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA36A Gene

Localization for SNORA36A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA36A Gene

Pathways & Interactions for SNORA36A Gene

SuperPathways for SNORA36A Gene

No Data Available

Interacting Proteins for SNORA36A Gene

Gene Ontology (GO) - Biological Process for SNORA36A Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORA36A Gene

Drugs & Compounds for SNORA36A Gene

No Compound Related Data Available

Transcripts for SNORA36A Gene

mRNA/cDNA for SNORA36A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA36A Gene

No ASD Table

Relevant External Links for SNORA36A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORA36A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORA36A Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORA36A Gene:


SOURCE GeneReport for Unigene cluster for SNORA36A Gene:

genes like me logo Genes that share expression patterns with SNORA36A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA36A Gene

Orthologs for SNORA36A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA36A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA36 34
  • 99 (a)
(Mus musculus)
Mammalia Gm25635 34
  • 85 (a)
(Canis familiaris)
Mammalia SNORA36 34
  • 83 (a)
(Bos Taurus)
Mammalia SNORA36 34
  • 80 (a)
(Monodelphis domestica)
Mammalia SNORA36 34
  • 75 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA36 34 34
  • 72 (a)
(Gallus gallus)
Aves SNORA36 34
  • 66 (a)
(Anolis carolinensis)
Reptilia SNORA36 34
  • 71 (a)
(Danio rerio)
Actinopterygii SNORA36 34
  • 62 (a)
Species where no ortholog for SNORA36A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA36A Gene

Gene Tree for SNORA36A (if available)
Gene Tree for SNORA36A (if available)

Paralogs for SNORA36A Gene

No data available for Paralogs for SNORA36A Gene

Variants for SNORA36A Gene

Sequence variations from dbSNP and Humsavar for SNORA36A Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs199422246 pathogenic, uncertain-significance, Dyskeratosis congenita X-linked, not specified 154,767,020(+) C/T upstream_transcript_variant
rs782504051 likely-benign, not specified 154,767,016(+) T/A upstream_transcript_variant
rs1008049790 -- 154,767,923(+) T/C upstream_transcript_variant
rs1009940831 -- 154,766,837(+) A/G upstream_transcript_variant
rs1010330594 -- 154,766,570(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORA36A Gene

Variant ID Type Subtype PubMed ID
esv33784 CNV gain+loss 17666407

Additional Variant Information for SNORA36A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORA36A Gene

Disorders for SNORA36A Gene

Additional Disease Information for SNORA36A

No disorders were found for SNORA36A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA36A Gene

Publications for SNORA36A Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 2 3 58
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 2 3 58
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORA36A Gene

Sources for SNORA36A Gene

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