Aliases for SNORA32 Gene

Subcategory (RNA class) for SNORA32 Gene

snoRNA

Number of RNA Genes sources:

4 / 17

Aliases for SNORA32 Gene

  • Small Nucleolar RNA, H/ACA Box 32 2 3 5
  • SNORA32 2 5 170
  • ACA32 2 3
  • SNODB190 177
  • RF00421 168

External Ids for SNORA32 Gene

Previous GeneCards Identifiers for SNORA32 Gene

  • GC11M093133
  • GC11U901138
  • GC11M093175
  • GC11M093185
  • GC11M093464
  • GC11M093732
  • GC11M093743
  • GC11M093932
  • GC11M094029
  • GC11M094042
  • GC11M094220
  • GC11M093755
  • GC11M093765
  • GC11M093774
  • GC11M093782
  • GC11M093793
  • GC11M093804
  • GC11M093935
  • GC11M093919

Summaries for SNORA32 Gene

GeneCards Summary for SNORA32 Gene

SNORA32 (Small Nucleolar RNA, H/ACA Box 32) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA32 Gene

  • Small nucleolar RNA SNORA32

Additional gene information for SNORA32 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA32 Gene

Genomics for SNORA32 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNORA32 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J093731 Enhancer 0.6 Ensembl ENCODE 600.7 -1.3 -1294 1.2 POLR2A RBFOX2 RBM22 SUPT5H POLR2B ZBED1 MIR1304 NONHSAG009375.2 SNORA1 SNORA18 SNORA25 SNORA32 SNORA8 SNORD5 SNORD6 piR-31447
GH11J093730 Enhancer 0.5 Ensembl 600.7 +1.0 998 0.2 RBFOX2 POLR2A SUPT5H ZNF652 ZBED1 ENSG00000279696 SNORA25 SNORA32 SNORD6 piR-31447 lnc-TAF1D-1 CEP295 C11orf54 lnc-VSTM5-1 TAF1D
GH11J093783 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.3 -54.4 -54402 4.2 HNRNPL CREB1 GATAD2A ZNF629 ZNF512 LEF1 ZNF692 POLR2A BACH1 JUND MED17 TAF1D C11orf54 SNORA1 MRE11 ANKRD49 SNORA18 SNORA25 SNORA32 SNORA40
GH11J093654 Enhancer 0.8 Ensembl ENCODE 10.1 +76.7 76747 4.9 CTCF FOXA1 RAD21 TRIM22 SCRT2 EGR1 RUNX3 SMC3 RFX5 GATA3 C11orf54 CEP295 TAF1D SNORA1 SNORA25 SNORA32 SNORD6 MED17 SNORA18 SNORA8
GH11J093768 Enhancer 0.6 Ensembl 11.9 -38.4 -38402 1.8 SOX6 SOX13 NFE2 ZNF530 HDAC2 KDM1A ZEB2 SOX5 CBFA2T2 CBFA2T3 CEP295 SNORA40 SNORA1 SNORA18 SNORA25 SNORA32 SNORA8 SNORD5 SNORD6 MED17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA32 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the SNORA32 gene promoter:
  • aMEF-2
  • GATA-1
  • GR
  • MEF-2
  • MEF-2A
  • POU2F1
  • POU2F1a
  • RORalpha1

Genomic Locations for SNORA32 Gene

Genomic Locations for SNORA32 Gene
chr11:93,730,979-93,731,099
(GRCh38/hg38)
Size:
121 bases
Orientation:
Minus strand
chr11:93,464,145-93,464,265
(GRCh37/hg19)
Size:
121 bases
Orientation:
Minus strand

Genomic View for SNORA32 Gene

Genes around SNORA32 on UCSC Golden Path with GeneCards custom track
SNORA32 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
SNORA32 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA32 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA32 Gene

Proteins for SNORA32 Gene

Post-translational modifications for SNORA32 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA32 Gene

Domains & Families for SNORA32 Gene

Gene Families for SNORA32 Gene

genes like me logo Genes that share domains with SNORA32: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA32 Gene

Function for SNORA32 Gene

Phenotypes From GWAS Catalog for SNORA32 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA32 Gene

Localization for SNORA32 Gene

Gene Ontology (GO) - Cellular Components for SNORA32 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORA32: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORA32 Gene

Pathways & Interactions for SNORA32 Gene

PathCards logo

SuperPathways for SNORA32 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORA32 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORA32: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORA32 Gene

Drugs & Compounds for SNORA32 Gene

No Compound Related Data Available

Transcripts for SNORA32 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SNORA32 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004AEC70_9606 snoRNA 121 7

HGNC: 32622,

RefSeq: NR_003032,

Ensembl: ENST00000384072 (view in UCSC) ,

Rfam: RF00421,

snoDB: SNODB190,

snOPY: Homo_sapiens300747,

ENA: AJ609442.1:1..121:ncRNA,

URS00006CF1CC_9606 snoRNA 121 1

Rfam: RF00421,

URS00006E6CBD_9606 snoRNA 121 1

Rfam: RF00421,

SNORA32 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for SNORA32 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA32 Gene

No ASD Table

Relevant External Links for SNORA32 Gene

GeneLoc Exon Structure for
SNORA32

Expression for SNORA32 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA32 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SNORA32

SOURCE GeneReport for Unigene cluster for SNORA32 Gene:

Hs.738740
genes like me logo Genes that share expression patterns with SNORA32: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA32 Gene

Orthologs for SNORA32 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORA32 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia SNORA32 31
  • 100 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Gm24412 31
  • 87 (a)
ManyToMany
Gm22358 31
  • 87 (a)
ManyToMany
Gm25188 31
  • 86 (a)
ManyToMany
Gm24610 31
  • 86 (a)
ManyToMany
Gm23451 31
  • 85 (a)
ManyToMany
Gm22303 31
  • 85 (a)
ManyToMany
Gm24355 31
  • 85 (a)
ManyToMany
Gm23406 31
  • 84 (a)
ManyToMany
Gm23455 31
  • 83 (a)
ManyToMany
Gm22459 31
  • 82 (a)
ManyToMany
Gm22293 31
  • 81 (a)
ManyToMany
Gm23404 31
  • 75 (a)
ManyToMany
Gm23299 31
  • 70 (a)
ManyToMany
Gm25859 31
  • 69 (a)
ManyToMany
Gm23713 31
  • 67 (a)
ManyToMany
Gm22615 31
  • 67 (a)
ManyToMany
Gm23939 31
  • 66 (a)
ManyToMany
SNORA32 31
  • 59 (a)
ManyToMany
Cow
(Bos Taurus)
Mammalia SNORA32 31
  • 85 (a)
OneToMany
Species where no ortholog for SNORA32 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for SNORA32 Gene

ENSEMBL:
Gene Tree for SNORA32 (if available)
TreeFam:
Gene Tree for SNORA32 (if available)

Paralogs for SNORA32 Gene

No data available for Paralogs for SNORA32 Gene

Variants for SNORA32 Gene

Additional dbSNP identifiers (rs#s) for SNORA32 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA32 Gene

Variant ID Type Subtype PubMed ID
esv3627294 CNV gain 21293372
nsv832232 CNV gain 17160897

Additional Variant Information for SNORA32 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA32

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNORA32 Gene

Disorders for SNORA32 Gene

Additional Disease Information for SNORA32

No disorders were found for SNORA32 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA32 Gene

Publications for SNORA32 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 2 3
  2. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 2 3
  3. TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions. (PMID: 27609421) Banks CA … Washburn MP (Molecular & cellular proteomics : MCP 2016) 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3

Products for SNORA32 Gene

Sources for SNORA32 Gene