Aliases for SNORA31B Gene

Subcategory (RNA class) for SNORA31B Gene

snoRNA

Number of RNA Genes sources:

1 / 14

Aliases for SNORA31B Gene

  • Small Nucleolar RNA, H/ACA Box 31B 2 3
  • AL138963.2 5
  • RF00322 172

External Ids for SNORA31B Gene

Previous GeneCards Identifiers for SNORA31B Gene

  • GC13M045344
  • GC13M045346
  • GC13M045347
  • GC00U936745
  • GC13U901540
  • GC13M045339
  • GC13M045341
  • GC13M045342
  • GC13M045343

Summaries for SNORA31B Gene

GeneCards Summary for SNORA31B Gene

SNORA31B (Small Nucleolar RNA, H/ACA Box 31B) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA31B Gene

  • Small nucleolar RNA SNORA31

Additional gene information for SNORA31B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA31B Gene

Genomics for SNORA31B Gene

GeneHancer (GH) Regulatory Elements for SNORA31B Gene

Promoters and enhancers for SNORA31B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J045339 Promoter 0.5 Ensembl 500.7 -0.8 -754 0.4 POLR2A RBFOX2 SNORA31 SNORA31B piR-33864 TPT1-AS1 TPT1 lnc-SLC25A30-4
GH13J045337 Enhancer 0.3 ENCODE 500.7 -1.6 -1574 0.2 POLR2A RBFOX2 SNORA31 SNORA31B piR-33864 ENSG00000273149 TPT1 lnc-SLC25A30-4
GH13J045331 Promoter/Enhancer 1.2 Ensembl ENCODE 0.7 +2.6 2615 5.5 POLR2G NCOR1 JUND FOS ZNF639 ZNF10 POLR2A TCF7 RCOR1 SKI COG3 SLC25A30 ENSG00000273149 SLC25A30-AS1 RCN1P2 TPT1-AS1 SNORA31B lnc-TPT1-1 TPT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA31B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORA31B Gene

Genomic Locations for SNORA31B Gene
chr13:45,336,314-45,336,447
(GRCh38/hg38)
Size:
134 bases
Orientation:
Minus strand
chr13:45,910,449-45,910,582
(GRCh37/hg19)
Size:
134 bases
Orientation:
Minus strand

Genomic View for SNORA31B Gene

Genes around SNORA31B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA31B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA31B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA31B Gene

Proteins for SNORA31B Gene

Post-translational modifications for SNORA31B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA31B Gene

Domains & Families for SNORA31B Gene

Gene Families for SNORA31B Gene

genes like me logo Genes that share domains with SNORA31B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA31B Gene

Function for SNORA31B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA31B Gene

Localization for SNORA31B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA31B Gene

Pathways & Interactions for SNORA31B Gene

PathCards logo

SuperPathways for SNORA31B Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNORA31B Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORA31B Gene

Drugs & Compounds for SNORA31B Gene

No Compound Related Data Available

Transcripts for SNORA31B Gene

mRNA/cDNA for SNORA31B Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA31B Gene

No ASD Table

Relevant External Links for SNORA31B Gene

GeneLoc Exon Structure for
SNORA31B

Expression for SNORA31B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA31B Gene

Orthologs for SNORA31B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA31B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA31 31
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORA31 31 31 31 31 31 31
  • 86 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia SNORA31 31 31 31 31 31
  • 83 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORA31 31
  • 79 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA31 31 31
  • 79 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORA31 31
  • 67 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORA31 31
  • 60 (a)
OneToMany
Species where no ortholog for SNORA31B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA31B Gene

ENSEMBL:
Gene Tree for SNORA31B (if available)
TreeFam:
Gene Tree for SNORA31B (if available)

Paralogs for SNORA31B Gene

No data available for Paralogs for SNORA31B Gene

Variants for SNORA31B Gene

Additional dbSNP identifiers (rs#s) for SNORA31B Gene

Additional Variant Information for SNORA31B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA31B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA31B Gene

Disorders for SNORA31B Gene

Additional Disease Information for SNORA31B

No disorders were found for SNORA31B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA31B Gene

Publications for SNORA31B Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 54

Products for SNORA31B Gene

Sources for SNORA31B Gene