Aliases for SNF8P1 Gene

Aliases for SNF8P1 Gene

  • SNF8 Pseudogene 1 2 3 5
  • SNF8, ESCRT-II Complex Subunit, Homolog Pseudogene 3
  • SNF8P1 5

External Ids for SNF8P1 Gene

Summaries for SNF8P1 Gene

GeneCards Summary for SNF8P1 Gene

SNF8P1 (SNF8 Pseudogene 1) is a Pseudogene.

Additional gene information for SNF8P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNF8P1 Gene

Genomics for SNF8P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNF8P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J228363 Enhancer 0.2 Ensembl 0.4 -10.8 -10826 0.7 piR-38732-010 piR-52261-155 piR-49423-139 lnc-SPHKAP-3 SNF8P1 SPHKAP PID1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNF8P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNF8P1 Gene

Latest Assembly
chr2:228,352,042-228,353,215
(GRCh38/hg38)
Size:
1,174 bases
Orientation:
Minus strand

Previous Assembly
chr2:229,216,758-229,217,568
(GRCh37/hg19 by Entrez Gene)
Size:
811 bases
Orientation:
Minus strand

chr2:229,216,836-229,217,931
(GRCh37/hg19 by Ensembl)
Size:
1,096 bases
Orientation:
Minus strand

Genomic View for SNF8P1 Gene

Genes around SNF8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNF8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNF8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNF8P1 Gene

Proteins for SNF8P1 Gene

Post-translational modifications for SNF8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNF8P1 Gene

Domains & Families for SNF8P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNF8P1 Gene

Function for SNF8P1 Gene

Phenotypes From GWAS Catalog for SNF8P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNF8P1 Gene

Localization for SNF8P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNF8P1 Gene

Pathways & Interactions for SNF8P1 Gene

PathCards logo

SuperPathways for SNF8P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNF8P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNF8P1 Gene

Drugs & Compounds for SNF8P1 Gene

No Compound Related Data Available

Transcripts for SNF8P1 Gene

mRNA/cDNA for SNF8P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNF8P1 Gene

No ASD Table

Relevant External Links for SNF8P1 Gene

GeneLoc Exon Structure for
SNF8P1

Expression for SNF8P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNF8P1 Gene

Orthologs for SNF8P1 Gene

Evolution for SNF8P1 Gene

ENSEMBL:
Gene Tree for SNF8P1 (if available)
TreeFam:
Gene Tree for SNF8P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for SNF8P1

No data available for Orthologs for SNF8P1 Gene

Paralogs for SNF8P1 Gene

No data available for Paralogs for SNF8P1 Gene

Variants for SNF8P1 Gene

Additional Variant Information for SNF8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNF8P1
Leiden Open Variation Database (LOVD)
SNF8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNF8P1 Gene

Disorders for SNF8P1 Gene

No disorders were found for SNF8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNF8P1 Gene

Publications for SNF8P1 Gene

No publications were found for SNF8P1 Gene.

No data available for Mastermind for SNF8P1 Gene

Products for SNF8P1 Gene

Sources for SNF8P1 Gene