Aliases for SNAR-D Gene

Subcategory (RNA class) for SNAR-D Gene

snRNA

Number of RNA Genes sources:

1 / 14

Aliases for SNAR-D Gene

  • Small NF90 (ILF3) Associated RNA D 2 3
  • Small ILF3/NF90-Associated RNA D 2 3
  • SNAR-D 2

External Ids for SNAR-D Gene

Previous GeneCards Identifiers for SNAR-D Gene

  • GC19U900974
  • GC19M050643

Summaries for SNAR-D Gene

GeneCards Summary for SNAR-D Gene

SNAR-D (Small NF90 (ILF3) Associated RNA D) is an RNA Gene, and is affiliated with the snRNA class. Diseases associated with SNAR-D include Fanconi Anemia, Complementation Group B.

Additional gene information for SNAR-D Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNAR-D Gene

Genomics for SNAR-D Gene

GeneHancer (GH) Regulatory Elements for SNAR-D Gene


Top Transcription factor binding sites by QIAGEN in the SNAR-D gene promoter:
  • FOXO4
  • HFH-1
  • HNF-3beta
  • IRF-1
  • LCR-F1
  • LyF-1

Genomic Locations for SNAR-D Gene

Genomic Locations for SNAR-D Gene
chr19:50,140,202-50,140,320
(GRCh38/hg38)
Size:
119 bases
Orientation:
Minus strand
chr19:50,643,459-50,643,577
(GRCh37/hg19)
Size:
119 bases
Orientation:
Minus strand

Genomic View for SNAR-D Gene

Genes around SNAR-D on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-D Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-D Gene

Proteins for SNAR-D Gene

Post-translational modifications for SNAR-D Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-D Gene

Domains & Families for SNAR-D Gene

Gene Families for SNAR-D Gene

genes like me logo Genes that share domains with SNAR-D: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNAR-D Gene

Function for SNAR-D Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-D Gene

Localization for SNAR-D Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNAR-D Gene

Pathways & Interactions for SNAR-D Gene

PathCards logo

SuperPathways for SNAR-D Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNAR-D Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNAR-D Gene

Drugs & Compounds for SNAR-D Gene

No Compound Related Data Available

Transcripts for SNAR-D Gene

mRNA/cDNA for SNAR-D Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 ENA transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-D Gene

No ASD Table

Relevant External Links for SNAR-D Gene

GeneLoc Exon Structure for
SNAR-D

Expression for SNAR-D Gene

SOURCE GeneReport for Unigene cluster for SNAR-D Gene:

Hs.717309
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNAR-D Gene

Orthologs for SNAR-D Gene

No data available for Orthologs and Evolution for SNAR-D Gene

Paralogs for SNAR-D Gene

No data available for Paralogs for SNAR-D Gene

Variants for SNAR-D Gene

Additional dbSNP identifiers (rs#s) for SNAR-D Gene

Structural Variations from Database of Genomic Variants (DGV) for SNAR-D Gene

Variant ID Type Subtype PubMed ID
esv24726 CNV gain+loss 19812545
esv2751796 CNV gain 17911159
esv2758766 CNV loss 17122850
nsv1133010 OTHER inversion 24896259
nsv1140251 OTHER inversion 24896259
nsv1152956 OTHER inversion 26484159
nsv2526 CNV insertion 18451855
nsv428369 CNV loss 18775914
nsv469748 CNV gain+loss 16826518
nsv509749 CNV insertion 20534489
nsv820746 CNV deletion 20802225
nsv9739 CNV gain+loss 18304495
nsv978834 CNV duplication 23825009

Additional Variant Information for SNAR-D Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNAR-D

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNAR-D Gene

Disorders for SNAR-D Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNAR-D Gene - From: DISEASES

Disorder Aliases PubMed IDs
fanconi anemia, complementation group b
  • fancb
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for SNAR-D

genes like me logo Genes that share disorders with SNAR-D: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNAR-D Gene

Publications for SNAR-D Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott AM … Mathews MB (Nucleic acids research 2007) 2 3 54

Products for SNAR-D Gene

Sources for SNAR-D Gene