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Aliases for SNAR-A12 Gene

Subcategory (RNA class) for SNAR-A12 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNAR-A12 Gene

  • Small ILF3/NF90-Associated RNA A12 2 3
  • Small Nuclear ILF3/NF90-Associated RNA A12 2 3
  • Small NF90-Associated RNA AA53102747 3
  • SNAR-A53102747 3

External Ids for SNAR-A12 Gene

Previous GeneCards Identifiers for SNAR-A12 Gene

  • GC19U900871
  • GC19P048410

Summaries for SNAR-A12 Gene

GeneCards Summary for SNAR-A12 Gene

SNAR-A12 (Small ILF3/NF90-Associated RNA A12) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SNAR-A12 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNAR-A12 Gene

Genomics for SNAR-A12 Gene

GeneHancer (GH) Regulatory Elements for SNAR-A12 Gene

Promoters and enhancers for SNAR-A12 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I047890 Enhancer 1.2 Ensembl ENCODE 0.4 -15.9 -15866 2.9 PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B YY1 SLC30A9 POLR2B ZNF766 LINC01595 BICRA ZC3H4 GRWD1 RASIP1 CCDC9 SULT2A1 SNAR-A12
GH19I047896 Enhancer 0.6 ENCODE 0.4 -10.8 -10849 1.1 FOXA2 RXRA MAX NR2F2 YY1 JUND HNF4G HNF4A MAFK SULT2A1 SNAR-A12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNAR-A12 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNAR-A12 gene promoter:

Genomic Locations for SNAR-A12 Gene

Genomic Locations for SNAR-A12 Gene
122 bases
Plus strand

Genomic View for SNAR-A12 Gene

Genes around SNAR-A12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNAR-A12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNAR-A12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNAR-A12 Gene

Proteins for SNAR-A12 Gene

Post-translational modifications for SNAR-A12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNAR-A12 Gene

Domains & Families for SNAR-A12 Gene

Gene Families for SNAR-A12 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNAR-A12: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNAR-A12 Gene

Function for SNAR-A12 Gene

Phenotypes From GWAS Catalog for SNAR-A12 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNAR-A12 Gene

Localization for SNAR-A12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNAR-A12 Gene

Pathways & Interactions for SNAR-A12 Gene

SuperPathways for SNAR-A12 Gene

No Data Available

Interacting Proteins for SNAR-A12 Gene

Gene Ontology (GO) - Biological Process for SNAR-A12 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNAR-A12 Gene

Drugs & Compounds for SNAR-A12 Gene

No Compound Related Data Available

Transcripts for SNAR-A12 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNAR-A12 Gene

No ASD Table

Relevant External Links for SNAR-A12 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for SNAR-A12 Gene

Expression for SNAR-A12 Gene

SOURCE GeneReport for Unigene cluster for SNAR-A12 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNAR-A12 Gene

Orthologs for SNAR-A12 Gene

No data available for Orthologs and Evolution for SNAR-A12 Gene

Paralogs for SNAR-A12 Gene

No data available for Paralogs for SNAR-A12 Gene

Variants for SNAR-A12 Gene

Sequence variations from dbSNP and Humsavar for SNAR-A12 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1012935129 -- 47,907,639(+) C/A upstream_transcript_variant
rs1045723767 -- 47,907,780(+) G/A non_coding_transcript_variant
rs182939739 -- 47,906,786(+) T/C upstream_transcript_variant
rs188837628 -- 47,908,190(+) T/G downstream_transcript_variant
rs199937065 -- 47,905,936(+) A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNAR-A12 Gene

Variant ID Type Subtype PubMed ID
dgv1792n106 CNV duplication 24896259
dgv2016e59 CNV duplication 20981092
dgv2017e59 CNV duplication 20981092
esv28347 CNV gain+loss 19812545
esv3360843 CNV duplication 20981092
esv3583447 CNV loss 25503493
esv3644559 CNV gain 21293372
esv991047 CNV gain 20482838
nsv1056164 CNV gain 25217958
nsv1058622 CNV gain 25217958
nsv1078446 CNV duplication 25765185
nsv1141335 CNV duplication 24896259
nsv178 CNV deletion 15895083
nsv2513 CNV deletion 18451855
nsv2515 CNV insertion 18451855
nsv428367 CNV gain+loss 18775914
nsv509748 CNV insertion 20534489
nsv953595 CNV duplication 24416366
nsv961230 CNV duplication 23825009
nsv9739 CNV gain+loss 18304495

Additional Variant Information for SNAR-A12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNAR-A12 Gene

Disorders for SNAR-A12 Gene

Additional Disease Information for SNAR-A12

No disorders were found for SNAR-A12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNAR-A12 Gene

Publications for SNAR-A12 Gene

  1. Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution. (PMID: 17855395) Parrott AM … Mathews MB (Nucleic acids research 2007) 3 58

Products for SNAR-A12 Gene

Sources for SNAR-A12 Gene

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