Aliases for SMYD3-AS1 Gene

Subcategory (RNA class) for SMYD3-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for SMYD3-AS1 Gene

  • SMYD3 Antisense RNA 1 2 3
  • Novel Transcript, Antisense To SMYD3 5
  • NONHSAG004888.2 91
  • HSALNG0012171 164
  • Lnc-KIF26B-2 165
  • AC092801.1 5

External Ids for SMYD3-AS1 Gene

Summaries for SMYD3-AS1 Gene

GeneCards Summary for SMYD3-AS1 Gene

SMYD3-AS1 (SMYD3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SMYD3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SMYD3-AS1 Gene

Genomics for SMYD3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SMYD3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SMYD3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SMYD3-AS1 Gene

Genomic Locations for SMYD3-AS1 Gene
chr1:246,108,625-246,113,869
(GRCh38/hg38)
Size:
5,245 bases
Orientation:
Plus strand

Genomic View for SMYD3-AS1 Gene

Genes around SMYD3-AS1 on UCSC Golden Path with GeneCards custom track
SMYD3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
SMYD3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMYD3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMYD3-AS1 Gene

Proteins for SMYD3-AS1 Gene

Post-translational modifications for SMYD3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMYD3-AS1 Gene

Domains & Families for SMYD3-AS1 Gene

Gene Families for SMYD3-AS1 Gene

genes like me logo Genes that share domains with SMYD3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SMYD3-AS1 Gene

Function for SMYD3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMYD3-AS1 Gene

Localization for SMYD3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMYD3-AS1 Gene

Pathways & Interactions for SMYD3-AS1 Gene

PathCards logo

SuperPathways for SMYD3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SMYD3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SMYD3-AS1 Gene

Drugs & Compounds for SMYD3-AS1 Gene

No Compound Related Data Available

Transcripts for SMYD3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SMYD3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000044285B_9606 lncRNA 581 3

Ensembl: ENST00000443763 (view in UCSC) ,

LNCipedia: lnc-KIF26B-2:1,

NONCODE: NONHSAT010699.2,

URS0000E809EB_9606 lncRNA 867 1

Ensembl: ENST00000651181 (view in UCSC) ,

URS00008BD1F9_9606 lncRNA 366 3

LncBook: HSALNT0025313,

LNCipedia: lnc-KIF26B-2:3,

NONCODE: NONHSAT010700.2,

URS00008C06A8_9606 lncRNA 324 2

LNCipedia: lnc-KIF26B-2:2,

NONCODE: NONHSAT010701.2,

URS00009AE393_9606 lncRNA 839 1

NONCODE: NONHSAT150887.1,

SMYD3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for SMYD3-AS1 Gene

No ASD Table

Relevant External Links for SMYD3-AS1 Gene

GeneLoc Exon Structure for
SMYD3-AS1

No data available for mRNA/cDNA for SMYD3-AS1 Gene

Expression for SMYD3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMYD3-AS1 Gene

Orthologs for SMYD3-AS1 Gene

Evolution for SMYD3-AS1 Gene

ENSEMBL:
Gene Tree for SMYD3-AS1 (if available)
TreeFam:
Gene Tree for SMYD3-AS1 (if available)

No data available for Orthologs for SMYD3-AS1 Gene

Paralogs for SMYD3-AS1 Gene

No data available for Paralogs for SMYD3-AS1 Gene

Variants for SMYD3-AS1 Gene

Additional dbSNP identifiers (rs#s) for SMYD3-AS1 Gene

Additional Variant Information for SMYD3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMYD3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMYD3-AS1 Gene

Disorders for SMYD3-AS1 Gene

No disorders were found for SMYD3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMYD3-AS1 Gene

Publications for SMYD3-AS1 Gene

No publications were found for SMYD3-AS1 Gene.

No data available for Mastermind for SMYD3-AS1 Gene

Products for SMYD3-AS1 Gene

Sources for SMYD3-AS1 Gene