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Aliases for SMPD4P1 Gene

Aliases for SMPD4P1 Gene

  • Sphingomyelin Phosphodiesterase 4 Pseudogene 1 2 3 5
  • Sphingomyelin Phosphodiesterase 4, Neutral Membrane (Neutral Sphingomyelinase-3) Pseudogene 1 2

External Ids for SMPD4P1 Gene

Previous GeneCards Identifiers for SMPD4P1 Gene

  • GC22M020959

Summaries for SMPD4P1 Gene

GeneCards Summary for SMPD4P1 Gene

SMPD4P1 (Sphingomyelin Phosphodiesterase 4 Pseudogene 1) is a Pseudogene.

Additional gene information for SMPD4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMPD4P1 Gene

Genomics for SMPD4P1 Gene

GeneHancer (GH) Regulatory Elements for SMPD4P1 Gene

Promoters and enhancers for SMPD4P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I020606 Enhancer 0.9 ENCODE 4.7 +50.2 50180 1.3 HDGF SMAD1 ATF1 ARID4B SIN3A ZNF2 ZNF48 ARID2 ZNF143 ATF7 LZTR1 DGCR8 TRMT2A RPL7AP70 MED15 RPL8P5 PI4KA LOC100420177 SCARF2 SERPIND1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SMPD4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SMPD4P1 Gene

Genomic Locations for SMPD4P1 Gene
54,320 bases
Minus strand

Genomic View for SMPD4P1 Gene

Genes around SMPD4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMPD4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMPD4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMPD4P1 Gene

Proteins for SMPD4P1 Gene

Post-translational modifications for SMPD4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMPD4P1 Gene

Domains & Families for SMPD4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMPD4P1 Gene

Function for SMPD4P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMPD4P1 Gene

Localization for SMPD4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMPD4P1 Gene

Pathways & Interactions for SMPD4P1 Gene

SuperPathways for SMPD4P1 Gene

No Data Available

Interacting Proteins for SMPD4P1 Gene

Gene Ontology (GO) - Biological Process for SMPD4P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SMPD4P1 Gene

Drugs & Compounds for SMPD4P1 Gene

No Compound Related Data Available

Transcripts for SMPD4P1 Gene

mRNA/cDNA for SMPD4P1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SMPD4P1 Gene

No ASD Table

Relevant External Links for SMPD4P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SMPD4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMPD4P1 Gene

mRNA differential expression in normal tissues according to GTEx for SMPD4P1 Gene

This gene is overexpressed in Testis (x26.9).

NURSA nuclear receptor signaling pathways regulating expression of SMPD4P1 Gene:

genes like me logo Genes that share expression patterns with SMPD4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMPD4P1 Gene

Orthologs for SMPD4P1 Gene

Evolution for SMPD4P1 Gene

Gene Tree for SMPD4P1 (if available)
Gene Tree for SMPD4P1 (if available)

No data available for Orthologs for SMPD4P1 Gene

Paralogs for SMPD4P1 Gene

No data available for Paralogs for SMPD4P1 Gene

Variants for SMPD4P1 Gene

Additional Variant Information for SMPD4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMPD4P1 Gene

Disorders for SMPD4P1 Gene

Additional Disease Information for SMPD4P1

No disorders were found for SMPD4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SMPD4P1 Gene

Publications for SMPD4P1 Gene

No publications were found for SMPD4P1 Gene.

Products for SMPD4P1 Gene

Sources for SMPD4P1 Gene

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