Aliases for SMIM34A Gene

Aliases for SMIM34A Gene

  • Small Integral Membrane Protein 34A 2 3 4 5
  • SMIM34A 5

External Ids for SMIM34A Gene

Summaries for SMIM34A Gene

GeneCards Summary for SMIM34A Gene

SMIM34A (Small Integral Membrane Protein 34A) is a Protein Coding gene. An important paralog of this gene is SMIM34B.

Additional gene information for SMIM34A Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SMIM34A Gene

Genomics for SMIM34A Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SMIM34A Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SMIM34A on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SMIM34A Gene

Genomic Locations for SMIM34A Gene
chr21:34,418,715-34,423,951
(GRCh38/hg38)
Size:
5,237 bases
Orientation:
Minus strand
chr21:35,791,013-35,796,264
(GRCh37/hg19)
Size:
5,252 bases
Orientation:
Minus strand

Genomic View for SMIM34A Gene

Genes around SMIM34A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMIM34A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMIM34A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMIM34A Gene

Proteins for SMIM34A Gene

  • Protein details for SMIM34A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MWV9-SM34A_HUMAN
    Recommended name:
    Small integral membrane protein 34A
    Protein Accession:
    A8MWV9

    Protein attributes for SMIM34A Gene

    Size:
    139 amino acids
    Molecular mass:
    15007 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SMIM34A Gene

Post-translational modifications for SMIM34A Gene

No Post-translational modifications

Other Protein References for SMIM34A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SMIM34A Gene

Domains & Families for SMIM34A Gene

Gene Families for SMIM34A Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins

Protein Domains for SMIM34A Gene

ProtoNet:
genes like me logo Genes that share domains with SMIM34A: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SMIM34A Gene

Function for SMIM34A Gene

Phenotypes From GWAS Catalog for SMIM34A Gene

Phenotypes for SMIM34A Gene

genes like me logo Genes that share phenotypes with SMIM34A: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMIM34A Gene

Localization for SMIM34A Gene

Subcellular locations from UniProtKB/Swiss-Prot for SMIM34A Gene

Membrane. Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for SMIM34A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SMIM34A: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SMIM34A Gene

Pathways & Interactions for SMIM34A Gene

PathCards logo

SuperPathways for SMIM34A Gene

No Data Available

Interacting Proteins for SMIM34A Gene

Gene Ontology (GO) - Biological Process for SMIM34A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SMIM34A Gene

Drugs & Compounds for SMIM34A Gene

No Compound Related Data Available

Transcripts for SMIM34A Gene

mRNA/cDNA for SMIM34A Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMIM34A Gene

No ASD Table

Relevant External Links for SMIM34A Gene

GeneLoc Exon Structure for
SMIM34A

Expression for SMIM34A Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMIM34A Gene

Orthologs for SMIM34A Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for SMIM34A Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 96 (a)
OneToOne
Species where no ortholog for SMIM34A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for SMIM34A Gene

ENSEMBL:
Gene Tree for SMIM34A (if available)
TreeFam:
Gene Tree for SMIM34A (if available)

Paralogs for SMIM34A Gene

Paralogs for SMIM34A Gene

genes like me logo Genes that share paralogs with SMIM34A: view

Variants for SMIM34A Gene

Additional dbSNP identifiers (rs#s) for SMIM34A Gene

Additional Variant Information for SMIM34A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMIM34A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMIM34A Gene

Disorders for SMIM34A Gene

No disorders were found for SMIM34A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SMIM34A Gene

Publications for SMIM34A Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 4

No data available for Mastermind for SMIM34A Gene

Products for SMIM34A Gene

Sources for SMIM34A Gene