Aliases for SMIM15P2 Gene

Aliases for SMIM15P2 Gene

  • SMIM15 Pseudogene 2 2 3
  • Small Integral Membrane Protein 15 (SMIM15) Pseudogene 5
  • AL021997.1 5

External Ids for SMIM15P2 Gene

Summaries for SMIM15P2 Gene

GeneCards Summary for SMIM15P2 Gene

SMIM15P2 (SMIM15 Pseudogene 2) is a Pseudogene.

Additional gene information for SMIM15P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SMIM15P2 Gene

Genomics for SMIM15P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SMIM15P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J027805 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 3.7 +507.7 507737 12.7 ARHGAP35 CEBPG SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 REST ZNF629 Z46261-004 piR-57462 ZKSCAN4 ZSCAN9 ZKSCAN8 ZKSCAN3 ZSCAN12 ZNF603P ZSCAN26 GUSBP2
GH06J027902 Promoter/Enhancer 1.5 ENCODE CraniofacialAtlas dbSUPER 3.8 +416.9 416851 1.7 ZNF221 CREB1 GATAD2A ATF7 TEAD4 PRDM10 ZNF629 TFE3 SOX13 IKZF1 MF281432-010 TRX-CAT1-7 TRG-GCC2-3 piR-30961-008 piR-33437-009 piR-33486-005 piR-31924-006 ZSCAN12 ZKSCAN8 ZKSCAN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SMIM15P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SMIM15P2 Gene

Genomic Locations for SMIM15P2 Gene
chr6:28,319,660-28,319,852
(GRCh38/hg38)
Size:
193 bases
Orientation:
Minus strand
chr6:28,287,437-28,287,629
(GRCh37/hg19)
Size:
193 bases
Orientation:
Minus strand

Genomic View for SMIM15P2 Gene

Genes around SMIM15P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMIM15P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMIM15P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SMIM15P2 Gene

Proteins for SMIM15P2 Gene

Post-translational modifications for SMIM15P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMIM15P2 Gene

Domains & Families for SMIM15P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SMIM15P2 Gene

Function for SMIM15P2 Gene

Phenotypes From GWAS Catalog for SMIM15P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMIM15P2 Gene

Localization for SMIM15P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMIM15P2 Gene

Pathways & Interactions for SMIM15P2 Gene

PathCards logo

SuperPathways for SMIM15P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SMIM15P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SMIM15P2 Gene

Drugs & Compounds for SMIM15P2 Gene

No Compound Related Data Available

Transcripts for SMIM15P2 Gene

mRNA/cDNA for SMIM15P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SMIM15P2 Gene

No ASD Table

Relevant External Links for SMIM15P2 Gene

GeneLoc Exon Structure for
SMIM15P2

Expression for SMIM15P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMIM15P2 Gene

Orthologs for SMIM15P2 Gene

Evolution for SMIM15P2 Gene

ENSEMBL:
Gene Tree for SMIM15P2 (if available)
TreeFam:
Gene Tree for SMIM15P2 (if available)

No data available for Orthologs for SMIM15P2 Gene

Paralogs for SMIM15P2 Gene

No data available for Paralogs for SMIM15P2 Gene

Variants for SMIM15P2 Gene

Additional Variant Information for SMIM15P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMIM15P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMIM15P2 Gene

Disorders for SMIM15P2 Gene

No disorders were found for SMIM15P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SMIM15P2 Gene

Publications for SMIM15P2 Gene

No publications were found for SMIM15P2 Gene.

No data available for Mastermind for SMIM15P2 Gene

Products for SMIM15P2 Gene

Sources for SMIM15P2 Gene