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Aliases for SMAD1-AS2 Gene

Subcategory (RNA class) for SMAD1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SMAD1-AS2 Gene

  • SMAD1 Antisense RNA 2 2 3 5

External Ids for SMAD1-AS2 Gene

Previous GeneCards Identifiers for SMAD1-AS2 Gene

  • GC04M146420

Summaries for SMAD1-AS2 Gene

GeneCards Summary for SMAD1-AS2 Gene

SMAD1-AS2 (SMAD1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SMAD1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMAD1-AS2 Gene

Genomics for SMAD1-AS2 Gene

GeneHancer (GH) Regulatory Elements for SMAD1-AS2 Gene

Promoters and enhancers for SMAD1-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J145500 Enhancer 0.7 Ensembl ENCODE dbSUPER 650.7 +1.7 1679 2.2 SCRT2 SMAD1-AS2 MMAA SMAD1
GH04J145503 Enhancer 0.4 Ensembl dbSUPER 650.7 -0.7 -721 0.2 SMAD1-AS2 SMAD1-AS1 SMAD1
GH04J145530 Enhancer 0.9 Ensembl ENCODE dbSUPER 13.5 -29.5 -29490 3.5 ZNF121 POLR2A MAFK CHD2 SMAD1-AS2 SMAD1 OTUD4 MMAA SMAD1-AS1 LOC285422
GH04J145538 Enhancer 0.9 Ensembl ENCODE dbSUPER 13 -37.7 -37718 4.1 PRDM6 SCRT2 ATF7 ZNF600 ATF2 SMAD1-AS1 SMAD1-AS2 SMAD1 LOC285422
GH04J145480 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 0.4 +19.9 19939 4.3 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 GLI4 ZNF2 ZNF48 YY1 SMAD1 SMAD1-AS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SMAD1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SMAD1-AS2 Gene

Genomic Locations for SMAD1-AS2 Gene
5,932 bases
Minus strand
5,899 bases
Minus strand

Genomic View for SMAD1-AS2 Gene

Genes around SMAD1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMAD1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMAD1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMAD1-AS2 Gene

Proteins for SMAD1-AS2 Gene

Post-translational modifications for SMAD1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SMAD1-AS2 Gene

Domains & Families for SMAD1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SMAD1-AS2 Gene

Function for SMAD1-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SMAD1-AS2 Gene

Localization for SMAD1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SMAD1-AS2 Gene

Pathways & Interactions for SMAD1-AS2 Gene

SuperPathways for SMAD1-AS2 Gene

No Data Available

Interacting Proteins for SMAD1-AS2 Gene

Gene Ontology (GO) - Biological Process for SMAD1-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SMAD1-AS2 Gene

Drugs & Compounds for SMAD1-AS2 Gene

No Compound Related Data Available

Transcripts for SMAD1-AS2 Gene

mRNA/cDNA for SMAD1-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SMAD1-AS2 Gene

No ASD Table

Relevant External Links for SMAD1-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SMAD1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMAD1-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for SMAD1-AS2 Gene

This gene is overexpressed in Testis (x49.0).
genes like me logo Genes that share expression patterns with SMAD1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMAD1-AS2 Gene

Orthologs for SMAD1-AS2 Gene

Evolution for SMAD1-AS2 Gene

Gene Tree for SMAD1-AS2 (if available)
Gene Tree for SMAD1-AS2 (if available)

No data available for Orthologs for SMAD1-AS2 Gene

Paralogs for SMAD1-AS2 Gene

No data available for Paralogs for SMAD1-AS2 Gene

Variants for SMAD1-AS2 Gene

Sequence variations from dbSNP and Humsavar for SMAD1-AS2 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000984959 -- 145,501,486(-) A/T intron_variant
rs1001118835 -- 145,498,540(-) A/G intron_variant
rs1001261363 -- 145,504,664(-) T/C upstream_transcript_variant
rs1001686227 -- 145,501,626(-) G/A intron_variant
rs1001823440 -- 145,501,279(-) TTTTTT/TTTTTTT intron_variant

Additional Variant Information for SMAD1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SMAD1-AS2 Gene

Disorders for SMAD1-AS2 Gene

Additional Disease Information for SMAD1-AS2

No disorders were found for SMAD1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SMAD1-AS2 Gene

Publications for SMAD1-AS2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SMAD1-AS2 Gene

Sources for SMAD1-AS2 Gene

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