Aliases for SLC7A5P1 Gene
Aliases for SLC7A5P1 Gene
- Solute Carrier Family 7 Member 5 Pseudogene 1 2 3 5
- Solute Carrier Family 7 (Amino Acid Transporter Light Chain, L System), Member 5 Pseudogene 1 2 3
- HLAT1 3-Transmembrane Protein MLAS 3 4
- MLAS 3 4
- Solute Carrier Family 7 (Cationic Amino Acid Transporter, Y+ System), Member 5 Pseudogene 1 3
- Putative L-Type Amino Acid Transporter 1-Like Protein MLAS 3
External Ids for SLC7A5P1 Gene
- HGNC: 29458
- Entrez Gene: 81893
- Ensembl: ENSG00000260727
- UniProtKB: Q8MH63
Previous GeneCards Identifiers for SLC7A5P1 Gene
- GC16M029533
- GC16M029534
Summaries for SLC7A5P1 Gene
-
This locus represents a pseudogene of the L-type amino acid transporter 1. Transcripts initiating at this locus read through to downstream SMG1 pseudogene 2 (SMG1P2). [provided by RefSeq, Feb 2016]
GeneCards Summary for SLC7A5P1 Gene
SLC7A5P1 (Solute Carrier Family 7 Member 5 Pseudogene 1) is a Pseudogene.
Additional gene information for SLC7A5P1 Gene
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC7A5P1 Gene
Genomics for SLC7A5P1 Gene
GeneHancer (GH) Regulatory Elements for SLC7A5P1 Gene
Promoters and enhancers for SLC7A5P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH16I029611 | Promoter/Enhancer | 1.7 | Ensembl ENCODE dbSUPER | 550.8 | -0.3 | -294 | 5.6 | HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF207 FOS SP3 ZNF592 KAT8 | PIR61517 SLC7A5P1 ATXN2L ENSG00000261766 NPIPB12 SH2B1 NPIPB13 INO80E SPNS1 ZNF764 | |
| GH16I029114 | Enhancer | 1.6 | FANTOM5 Ensembl ENCODE dbSUPER | 4.7 | +497.6 | 497644 | 3 | FOXA2 ARID4B ZNF48 YY1 GLIS2 ZNF213 ARID2 ATF7 SP3 RXRA | SPNS1 RRN3P2 NPIPB12 ENSG00000260853 LOC101928215 INO80E ATXN2L SMG1P2 NFATC2IP ENSG00000198106 | |
| GH16I029618 | Enhancer | 0.4 | Ensembl ENCODE | 0.8 | -4.8 | -4842 | 1.1 | SLC7A5P1 PIR53735 CA5AP1 | ||
| GH16I029621 | Enhancer | 0.2 | dbSUPER | 0.4 | -8.3 | -8307 | 0.1 | PIR40948 PIR53735 SLC7A5P1 CA5AP1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SLC7A5P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SLC7A5P1 Gene
Genomic Locations for SLC7A5P1 Gene
- chr16:29,613,103-29,613,717
- (GRCh38/hg38)
- Size:
- 615 bases
- Orientation:
- Minus strand
- chr16:29,624,424-29,625,038
- (GRCh37/hg19)
Genomic View for SLC7A5P1 Gene
Genes around SLC7A5P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16p11.2 by Ensembl
- 16p11.2 by Entrez Gene
- 16p11.2 by HGNC
SLC7A5P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SLC7A5P1 Gene
Proteins for SLC7A5P1 Gene
-
Protein details for SLC7A5P1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8MH63-LAT1N_HUMAN
- Recommended name:
- Putative L-type amino acid transporter 1-like protein MLAS
- Protein Accession:
- Q8MH63
Protein attributes for SLC7A5P1 Gene
- Size:
- 180 amino acids
- Molecular mass:
- 18779 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for SLC7A5P1 Gene
No Post-translational modifications
Antibody Products
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Protein Products
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No data available for DME Specific Peptides for SLC7A5P1 Gene
Domains & Families for SLC7A5P1 Gene
Protein Domains for SLC7A5P1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for SLC7A5P1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q8MH63UniProtKB/Swiss-Prot:
LAT1N_HUMAN :- Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
- Family:
-
- Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
No data available for Gene Families for SLC7A5P1 Gene
Function for SLC7A5P1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0015175 | neutral amino acid transmembrane transporter activity | IBA | -- |
| GO:0015179 | L-amino acid transmembrane transporter activity | IBA | -- |
| GO:0015297 | antiporter activity | IBA | -- |
Phenotypes for SLC7A5P1 Gene
- GenomeRNAi human phenotypes for SLC7A5P1:
Animal Model Products
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-
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CRISPR Products
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-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
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Inhibitory RNA Products
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Clone Products
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-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SLC7A5P1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC7A5P1 Gene
Localization for SLC7A5P1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for SLC7A5P1 Gene
- Membrane; Multi-pass membrane protein.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005887 | integral component of plasma membrane | IBA | -- |
No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SLC7A5P1 Gene
Pathways & Interactions for SLC7A5P1 Gene
No Data Available
Interacting Proteins for SLC7A5P1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0015804 | neutral amino acid transport | IBA | -- |
| GO:1902475 | L-alpha-amino acid transmembrane transport | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for SLC7A5P1 Gene
Transcripts for SLC7A5P1 Gene
mRNA/cDNA for SLC7A5P1 Gene
- (1) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (179) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for SLC7A5P1 Gene
CRISPR Products
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- Applied Biological Materials CRISPR for SLC7A5P1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SLC7A5P1
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for SLC7A5P1
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Clone Products
- GenScript: Custom all cDNA clones Services for SLC7A5P1
- Sino Biological Human cDNA Clone for SLC7A5P1
- VectorBuilder custom plasmid, inducible vectors for SLC7A5P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SLC7A5P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SLC7A5P1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for SLC7A5P1 Gene
NURSA nuclear receptor signaling pathways regulating expression of SLC7A5P1 Gene:
SLC7A5P1SOURCE GeneReport for Unigene cluster for SLC7A5P1 Gene:
Hs.677169mRNA Expression by UniProt/SwissProt for SLC7A5P1 Gene:
Q8MH63-LAT1N_HUMAN
Tissue specificity:
Expressed in peripheral blood mononuclear cells and lymphoid and myeloid cell lines.
Primer Products
-
OriGene qPCR primer pairs for SLC7A5P1
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC7A5P1 Gene
Orthologs for SLC7A5P1 Gene
No data available for Orthologs for SLC7A5P1 Gene
Paralogs for SLC7A5P1 Gene
(10) SIMAP similar genes for SLC7A5P1 Gene using alignment to 1 proteins:
No data available for Paralogs for SLC7A5P1 Gene
Variants for SLC7A5P1 Gene
Additional Variant Information for SLC7A5P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SLC7A5P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SLC7A5P1 Gene
Disorders for SLC7A5P1 Gene
Additional Disease Information for SLC7A5P1
No disorders were found for SLC7A5P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC7A5P1 Gene
Publications for SLC7A5P1 Gene
- Up-regulated expression of a novel gene in activated human peripheral blood mononuclear cells that is a truncated paralog of the human system L-amino acid transporter 1. (PMID: 12009310) Ito M … Tsurudome M (The international journal of biochemistry & cell biology 2002) 2 3 4 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
- Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 58
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
- Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus BJ … Adams MD (Genomics 1999) 3 58
Products for SLC7A5P1 Gene
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- Cyagen custom Knockout/knockin (KOKI) mouse models for SLC7A5P1
- VectorBuilder custom plasmid, inducible vectors for SLC7A5P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SLC7A5P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SLC7A5P1
- Search GeneTex for Proteins for SLC7A5P1
- Search ViGene Biosciences for SLC7A5P1
Sources for SLC7A5P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
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- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
