Aliases for SLC7A15P Gene

Aliases for SLC7A15P Gene

  • Solute Carrier Family 7 Member 15, Pseudogene 2 3 5
  • Solute Carrier Family 7 (Cationic Amino Acid Transporter, Y+ System), Member 15, Pseudogene 3
  • Aromatic-Preferring Amino Acid Transporter Pseudogene 3
  • Solute Carrier Family 7, Member 15, Pseudogene 2
  • ARPAT 3

External Ids for SLC7A15P Gene

Previous GeneCards Identifiers for SLC7A15P Gene

  • GC02P020550
  • GC02P020587

Summaries for SLC7A15P Gene

GeneCards Summary for SLC7A15P Gene

SLC7A15P (Solute Carrier Family 7 Member 15, Pseudogene) is a Pseudogene.

Additional gene information for SLC7A15P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC7A15P Gene

Genomics for SLC7A15P Gene

GeneHancer (GH) Regulatory Elements for SLC7A15P Gene

Promoters and enhancers for SLC7A15P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J020385 Enhancer 0.2 Ensembl 500.7 -0.6 -585 0.4 SLC7A15P PUM2 piR-31534-382
GH02J020381 Enhancer 0.9 Ensembl ENCODE 0.7 -4.7 -4685 1.8 ZNF217 TRIM28 CUX1 CTBP1 ESRRA NFIC ZNF592 ZBTB17 MBD2 ESR1 piR-31534-382 SDC1 SLC7A15P
GH02J020383 Enhancer 0.7 Ensembl ENCODE 0.7 -3.0 -3031 0.7 ZBTB40 FOS CTCF FOXA2 RAD21 SMC3 FOXA1 CEBPA PUM2 SLC7A15P piR-31534-382
GH02J020392 Enhancer 0.6 Ensembl 0.4 +5.9 5915 1 ZNF740 MYC USF1 FOSL1 ZNF395 FOSL2 KLF17 BHLHE40 VEZF1 JUND PUM2 SDC1 SLC7A15P piR-57133-322 lnc-PUM2-4
GH02J020399 Enhancer 0.3 Ensembl 0.4 +12.9 12915 1 FOS piR-57133-322 SDC1 MATN3 SLC7A15P lnc-PUM2-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC7A15P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC7A15P Gene

Genomic Locations for SLC7A15P Gene
chr2:20,386,386-20,396,588
(GRCh38/hg38)
Size:
10,203 bases
Orientation:
Plus strand
chr2:20,586,147-20,596,349
(GRCh37/hg19)
Size:
10,203 bases
Orientation:
Plus strand

Genomic View for SLC7A15P Gene

Genes around SLC7A15P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC7A15P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC7A15P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC7A15P Gene

Proteins for SLC7A15P Gene

Post-translational modifications for SLC7A15P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC7A15P Gene

Domains & Families for SLC7A15P Gene

Gene Families for SLC7A15P Gene

genes like me logo Genes that share domains with SLC7A15P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC7A15P Gene

Function for SLC7A15P Gene

Phenotypes From GWAS Catalog for SLC7A15P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC7A15P Gene

Localization for SLC7A15P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC7A15P Gene

Pathways & Interactions for SLC7A15P Gene

PathCards logo

SuperPathways for SLC7A15P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SLC7A15P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC7A15P Gene

Drugs & Compounds for SLC7A15P Gene

No Compound Related Data Available

Transcripts for SLC7A15P Gene

mRNA/cDNA for SLC7A15P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC7A15P Gene

No ASD Table

Relevant External Links for SLC7A15P Gene

GeneLoc Exon Structure for
SLC7A15P

Expression for SLC7A15P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC7A15P Gene

genes like me logo Genes that share expression patterns with SLC7A15P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC7A15P Gene

Orthologs for SLC7A15P Gene

Evolution for SLC7A15P Gene

ENSEMBL:
Gene Tree for SLC7A15P (if available)
TreeFam:
Gene Tree for SLC7A15P (if available)

No data available for Orthologs for SLC7A15P Gene

Paralogs for SLC7A15P Gene

No data available for Paralogs for SLC7A15P Gene

Variants for SLC7A15P Gene

Additional Variant Information for SLC7A15P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC7A15P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC7A15P Gene

Disorders for SLC7A15P Gene

Additional Disease Information for SLC7A15P

Genetic Association Database
(GAD)

No disorders were found for SLC7A15P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC7A15P Gene

Publications for SLC7A15P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 2 3 54
  2. Is there selection for the pace of successive inactivation of the arpAT gene in primates? (PMID: 18566733) Casals F … Bertranpetit J (Journal of molecular evolution 2008) 3 54
  3. Identification and functional characterization of a novel low affinity aromatic-preferring amino acid transporter (arpAT). One of the few proteins silenced during primate evolution. (PMID: 15757906) Fernández E … Chillarón J (The Journal of biological chemistry 2005) 3 54

Products for SLC7A15P Gene

Sources for SLC7A15P Gene