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Aliases for SLC6A21P Gene
Aliases for SLC6A21P Gene
- Solute Carrier Family 6 Member 21, Pseudogene 2 3 5
- Solute Carrier Family 6 (Neurotransmitter Transporter), Member 21 (Pseudogene) 3
- Solute Carrier Family 6 (Neutral Amino Acid Transporter), Member 15 Pseudogene 3
- Solute Carrier Family 6 (Neurotransmitter Transporter), Member 21, Pseudogene 2
- Solute Carrier Family 6 (Neurotransmitter Transporter), Member 21 2
- Solute Carrier Family 6, Member 21, Pseudogene 2
- SLC6A21P 5
- SLC6A21 3
External Ids for SLC6A21P Gene
- HGNC: 31400
- Entrez Gene: 652969
- Ensembl: ENSG00000269009
Previous HGNC Symbols for SLC6A21P Gene
- SLC6A21
Previous GeneCards Identifiers for SLC6A21P Gene
- GC19U900662
- GC19M049755
Summaries for SLC6A21P Gene
GeneCards Summary for SLC6A21P Gene
SLC6A21P (Solute Carrier Family 6 Member 21, Pseudogene) is a Pseudogene.
Additional gene information for SLC6A21P Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC6A21P Gene
Genomics for SLC6A21P Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for SLC6A21P Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19J049271 | Enhancer | 0.8 | Ensembl ENCODE | 0.4 | -15.7 | -15727 | 2 | ZIC2 ARNT ZBTB44 JUND CTBP1 ZEB1 OSR2 FOS PKNOX1 ZNF217 | DKKL1 ENSG00000268686 KASH5 TRPM4 SUMO1P4 SLC6A21P SLC6A16 | |
| GH19J049231 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +24.6 | 24648 | 1 | PRDM1 RELA ZNF24 IKZF2 EED DPF2 RUNX3 CBFB TCF12 BCL11A | LOC107985340 piR-43164-034 SLC6A21P TRPM4 SLC6A16 | |
| GH19J049226 | Enhancer | 0.9 | Ensembl ENCODE | 0.3 | +30.1 | 30112 | 0.7 | CTCF TEAD4 ZNF143 REST RAD21 TRIM22 RUNX3 ZNF444 ZSCAN29 SMC3 | LOC107985340 piR-43164-034 SLC6A21P TRPM4 SLC6A16 | |
| GH19J049224 | Enhancer | 0.8 | Ensembl ENCODE | 0.3 | +31.4 | 31351 | 0.7 | CTCF PRDM10 REST RAD21 ZNF561 EGR1 ZNF580 SMC3 MAX KLF8 | piR-43164-034 LOC107985340 SLC6A21P TRPM4 SLC6A16 | |
| GH19J049270 | Enhancer | 0.3 | Ensembl | 0.4 | -14.4 | -14361 | 0.2 | ZNF121 | ENSG00000268686 SUMO1P4 SLC6A21P SLC6A16 TRPM4 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SLC6A21P on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for SLC6A21P Gene
Genomic Locations for SLC6A21P Gene
- chr19:49,252,333-49,256,340
- (GRCh38/hg38)
- Size:
- 4,008 bases
- Orientation:
- Minus strand
- chr19:49,755,590-49,759,597
- (GRCh37/hg19)
- Size:
- 4,008 bases
- Orientation:
- Minus strand
Genomic View for SLC6A21P Gene
Genes around SLC6A21P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19q13.33 by HGNC
- 19q13.33 by Entrez Gene
- 19q13.33 by Ensembl
SLC6A21P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SLC6A21P Gene
Proteins for SLC6A21P Gene
Post-translational modifications for SLC6A21P Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SLC6A21P
- Origene Custom Protein Services for SLC6A21P
No data available for DME Specific Peptides for SLC6A21P Gene
Domains & Families for SLC6A21P Gene
Gene Families for SLC6A21P Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC6A21P Gene
Function for SLC6A21P Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for SLC6A21P - Select products 50% OFF >
- * SLC6A21P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for SLC6A21P
miRNA Products
Inhibitory RNA Products
- Origene shrna and sirna products in human, mouse, rat for SLC6A21P
- Browse OriGene Inhibitory RNA Products For SLC6A21P
Clone Products
- Applied Biological Materials (abm): Clones for SLC6A21P - Select products 50% OFF >
- * SLC6A21P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene ORF clones in mouse for SLC6A21P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC6A21P Gene
Localization for SLC6A21P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC6A21P Gene
Transcripts for SLC6A21P Gene
mRNA/cDNA for SLC6A21P Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000599458 369 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for SLC6A21P - Select products 50% OFF >
- * SLC6A21P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for SLC6A21P
miRNA Products
Inhibitory RNA Products
- Origene shrna and sirna products in human, mouse, rat for SLC6A21P
- Browse OriGene Inhibitory RNA Products For SLC6A21P
Clone Products
- Applied Biological Materials (abm): Clones for SLC6A21P - Select products 50% OFF >
- * SLC6A21P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene ORF clones in mouse for SLC6A21P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
Relevant External Links for SLC6A21P Gene
- GeneLoc Exon Structure for
- SLC6A21P
Expression for SLC6A21P Gene
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC6A21P Gene
Orthologs for SLC6A21P Gene
No data available for Orthologs for SLC6A21P Gene
Paralogs for SLC6A21P Gene
No data available for Paralogs for SLC6A21P Gene
Variants for SLC6A21P Gene
Additional Variant Information for SLC6A21P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SLC6A21P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC6A21P Gene
Disorders for SLC6A21P Gene
No disorders were found for SLC6A21P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC6A21P Gene
Publications for SLC6A21P Gene
- The repertoire of solute carriers of family 6: identification of new human and rodent genes. (PMID: 16125675) Höglund PJ … Fredriksson R (Biochemical and biophysical research communications 2005) 2 3
ExternalLinks
Products for SLC6A21P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SLC6A21P
- Origene Custom Protein Services for SLC6A21P
- Origene shrna and sirna products in human, mouse, rat for SLC6A21P
- Browse OriGene Inhibitory RNA Products For SLC6A21P
- OriGene qPCR primer pairs for SLC6A21P
- OriGene CRISPR knockouts for SLC6A21P
- OriGene ORF clones in mouse for SLC6A21P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SLC6A21P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for SLC6A21P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for SLC6A21P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SLC6A21P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for SLC6A21P
Sources for SLC6A21P Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB