SLC5A4P1 Gene (Pseudogene)

Solute Carrier Family 5 Member 4 Pseudogene 1

GC11P124274
GIFtS:
5
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Aliases for SLC5A4P1 Gene

Aliases for SLC5A4P1 Gene

  • Solute Carrier Family 5 Member 4 Pseudogene 1 2 3 5
  • Solute Carrier Family 5 (Low Affinity Glucose Cotransporter), Member 4 Pseudogene 1 2 3
  • Solute Carrier Family 5 (Glucose Activated Ion Channel), Member 4 Pseudogene 1 2 3
  • SLC5A4P1 5

External Ids for SLC5A4P1 Gene

Previous GeneCards Identifiers for SLC5A4P1 Gene

  • GC11P124145

Summaries for SLC5A4P1 Gene

GeneCards Summary for SLC5A4P1 Gene

SLC5A4P1 (Solute Carrier Family 5 Member 4 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC5A4P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC5A4P1 Gene

Genomics for SLC5A4P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SLC5A4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J124273 Enhancer 0.4 Ensembl 600.7 +0.0 31 1.2 FOSL1 IKZF1 NANOG CBFA2T3 SLC5A4P1 lnc-OR8G5-5 VWA5A OR8G1 OR8G5 piR-51137-027 lnc-OR8G5-6 LOC112267863 OR8D1
GH11J124275 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.7 +3.0 3031 2.8 CTCF LEF1 JUND PKNOX1 MTA1 DPF2 HDAC1 ETV6 SOX6 GATAD2B VWA5A OR8G5 OR8D1 CCDC15 OR8G2P TBRG1 OR8B12 SLC5A4P1 lnc-OR8G5-5 piR-51137-027
GH11J124271 Enhancer 0.4 Ensembl 0.7 -2.9 -2870 0.6 NFE2 ZNF316 MAFG EMSY lnc-OR8G5-4 OR8G1 OR8D1 SLC5A4P1 lnc-OR8G5-5 OR8G5 LOC112267863 lnc-OR8G5-6
GH11J124285 Enhancer 0.6 Ensembl ENCODE 0.4 +12.0 12049 1.8 FOXA1 CEBPB CREB1 FOSL1 TCF7L2 VWA5A OR8D1 OR8G5 CCDC15 SLC5A4P1 lnc-OR8G5-5 piR-51137-027 lnc-OR8G5-6 LOC112267863
GH11J124294 Enhancer 0.3 Ensembl 0.4 +20.9 20931 0.2 SPI1 MEIS2 piR-51137-027 OR8D1 OR8G5 SLC5A4P1 lnc-OR8G5-5 LOC112267863
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC5A4P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SLC5A4P1 Gene

Genomic Locations for SLC5A4P1 Gene
chr11:124,273,970-124,274,581
(GRCh38/hg38)
Size:
612 bases
Orientation:
Plus strand
chr11:124,143,866-124,144,477
(GRCh37/hg19)
Size:
612 bases
Orientation:
Plus strand

Genomic View for SLC5A4P1 Gene

Genes around SLC5A4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC5A4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC5A4P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SLC5A4P1 Gene

Proteins for SLC5A4P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SLC5A4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC5A4P1 Gene

Domains & Families for SLC5A4P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC5A4P1 Gene

Function for SLC5A4P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC5A4P1 Gene

Localization for SLC5A4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC5A4P1 Gene

Pathways & Interactions for SLC5A4P1 Gene

PathCards logo

SuperPathways for SLC5A4P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC5A4P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC5A4P1 Gene

Drugs & Compounds for SLC5A4P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SLC5A4P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SLC5A4P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SLC5A4P1 Gene

No ASD Table

Relevant External Links for SLC5A4P1 Gene

GeneLoc Exon Structure for
SLC5A4P1

Expression for SLC5A4P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC5A4P1 Gene

mRNA expression in normal human tissues for SLC5A4P1 Gene
mRNA expression by GTEx for SLC5A4P1 Gene
genes like me logo Genes that share expression patterns with SLC5A4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC5A4P1 Gene

Orthologs for SLC5A4P1 Gene

Evolution for SLC5A4P1 Gene

ENSEMBL:
Gene Tree for SLC5A4P1 (if available)
TreeFam:
Gene Tree for SLC5A4P1 (if available)

No data available for Orthologs for SLC5A4P1 Gene

Paralogs for SLC5A4P1 Gene

No data available for Paralogs for SLC5A4P1 Gene

Variants for SLC5A4P1 Gene

Additional Variant Information for SLC5A4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC5A4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC5A4P1 Gene

Disorders for SLC5A4P1 Gene

No disorders were found for SLC5A4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC5A4P1 Gene

Publications for SLC5A4P1 Gene

No publications were found for SLC5A4P1 Gene.

No data available for Mastermind for SLC5A4P1 Gene

Products for SLC5A4P1 Gene

Sources for SLC5A4P1 Gene