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Glycosylation of cellular glycoconjugates occurs in the endoplasmic reticulum (ER) and Golgi compartment, and requires transport of nucleotide sugars from the cytosol into the lumen of the ER and Golgi by specific transporters. The protein encoded by this gene resides in the ER, and transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to the ER lumen. It may participate in glucuronidation and/or chondroitin sulfate biosynthesis. Mutations in this gene are associated with Schneckenbecken dysplasia.[provided by RefSeq, Sep 2009]
SLC35D1 (Solute Carrier Family 35 Member D1) is a Protein Coding gene. Diseases associated with SLC35D1 include Schneckenbecken Dysplasia and Boomerang Dysplasia. Among its related pathways are Cytochrome P450 - arranged by substrate type and Metabolism. Gene Ontology (GO) annotations related to this gene include UDP-glucuronic acid transmembrane transporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. An important paralog of this gene is SLC35D2.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005461 | UDP-glucuronic acid transmembrane transporter activity | IBA | 21873635 |
GO:0005462 | UDP-N-acetylglucosamine transmembrane transporter activity | IBA | 21873635 |
GO:0005463 | UDP-N-acetylgalactosamine transmembrane transporter activity | IBA | 21873635 |
GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEA,IBA | 21873635 |
GO:0015297 | antiporter activity | IBA | 21873635 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005783 | endoplasmic reticulum | IEA | -- |
GO:0005789 | endoplasmic reticulum membrane | TAS | -- |
GO:0005794 | Golgi apparatus | IBA | 21873635 |
GO:0016020 | membrane | IEA | -- |
GO:0016021 | integral component of membrane | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006065 | UDP-glucuronate biosynthetic process | TAS | -- |
GO:0008643 | carbohydrate transport | IEA | -- |
GO:0015787 | UDP-glucuronic acid transmembrane transport | IEA | -- |
GO:0015789 | UDP-N-acetylgalactosamine transmembrane transport | IEA | -- |
GO:0030206 | chondroitin sulfate biosynthetic process | IEA | -- |
This gene was present in the common ancestor of eukaryotes.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | SLC35D1 30 31 |
|
OneToOne | |
Dog (Canis familiaris) |
Mammalia | SLC35D1 31 |
|
OneToOne | |
LOC100685241 30 |
|
||||
Cow (Bos Taurus) |
Mammalia | SLC35D2 31 |
|
OneToOne | |
SLC35D1 30 |
|
||||
Mouse (Mus musculus) |
Mammalia | Slc35d1 30 17 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Slc35d1 30 |
|
||
Platypus (Ornithorhynchus anatinus) |
Mammalia | SLC35D1 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | SLC35D1 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | SLC35D1 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | SLC35D1 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | LOC100497699 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | slc35d1a 30 31 |
|
OneToMany | |
slc35d1b 31 |
|
OneToMany | |||
zgc63651 30 |
|
||||
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP005200 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | frc 30 31 |
|
OneToMany | |
Worm (Caenorhabditis elegans) |
Secernentea | sqv-7 30 31 |
|
OneToMany | |
Thale Cress (Arabidopsis thaliana) |
eudicotyledons | AT4G32272 30 |
|
||
Rice (Oryza sativa) |
Liliopsida | Os02g0614100 30 |
|
||
Sea Squirt (Ciona savignyi) |
Ascidiacea | -- 31 |
|
OneToMany | |
Sea Vase (Ciona intestinalis) |
Ascidiacea | Cin.1995 30 |
|
SNP ID | Clinical significance and condition | Chr 01 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
1125 | Pathogenic: Schneckenbecken dysplasia | 67,047,264(-) | C/A | SPLICE_DONOR_VARIANT | |
1127 | Pathogenic: Schneckenbecken dysplasia | 67,052,009(-) | T/C | INTRON_VARIANT | |
642827 | Uncertain Significance: Schneckenbecken dysplasia | 67,052,794(-) | G/A | MISSENSE_VARIANT | |
661129 | Uncertain Significance: Schneckenbecken dysplasia | 67,049,807(-) | T/C | MISSENSE_VARIANT | |
662949 | Uncertain Significance: Schneckenbecken dysplasia | 67,020,409(-) | T/C | MISSENSE_VARIANT |
Disorder | Aliases | PubMed IDs |
---|---|---|
schneckenbecken dysplasia |
|
|
boomerang dysplasia |
|
|
achondrogenesis |
|
|
atelosteogenesis |
|
|
eiken syndrome |
|
|