SLC35C2P1 Gene (Pseudogene)

SLC35C2 Pseudogene 1

GC0XM016898
GIFtS:
3
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Aliases for SLC35C2P1 Gene

Aliases for SLC35C2P1 Gene

  • SLC35C2 Pseudogene 1 2 3
  • Solute Carrier Family 35 Member C2 Pseudogene 3

External Ids for SLC35C2P1 Gene

Summaries for SLC35C2P1 Gene

GeneCards Summary for SLC35C2P1 Gene

SLC35C2P1 (SLC35C2 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC35C2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC35C2P1 Gene

Genomics for SLC35C2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SLC35C2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0XJ016881 Promoter/Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas 0.4 +15.5 15544 2 CTCF PRDM10 RFX1 IKZF1 DDX20 REST RAD21 TRIM22 ZNF341 SCRT2 ENSG00000201467 TXLNG RNU4-6P RBBP7 ENSG00000223498 SLC35C2P1 REPS2
GH0XJ016892 Enhancer 0.8 ENCODE 0.4 +5.5 5548 0.2 CTCF PRDM10 IKZF1 FOXA1 PRDM1 ZNF143 REST RAD21 IKZF2 TRIM22 ENSG00000223498 SLC35C2P1 RNU4-6P RBBP7 REPS2
GH0XJ016885 Enhancer 0.5 Ensembl 0.4 +12.7 12720 0.8 PRDM10 RUNX3 ZNF112 PRDM6 SPI1 ENSG00000201467 REPS2 ENSG00000223498 RNU4-6P SLC35C2P1 RBBP7
GH0XJ016888 Enhancer 0.3 Ensembl 0.4 +9.6 9620 0.2 NR3C1 ENSG00000223498 SLC35C2P1 RNU4-6P RBBP7 REPS2
GH0XJ016895 Enhancer 0.2 Ensembl 0.7 +2.6 2620 1 REPS2 RBBP7 ENSG00000223498 SLC35C2P1 RNU4-6P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC35C2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SLC35C2P1 Gene

Genomic Locations for SLC35C2P1 Gene
chrX:16,897,360-16,898,521
(GRCh38/hg38)
Size:
1,162 bases
Orientation:
Minus strand

Genomic View for SLC35C2P1 Gene

Genes around SLC35C2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC35C2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC35C2P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SLC35C2P1 Gene

Proteins for SLC35C2P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SLC35C2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC35C2P1 Gene

Domains & Families for SLC35C2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC35C2P1 Gene

Function for SLC35C2P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC35C2P1 Gene

Localization for SLC35C2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC35C2P1 Gene

Pathways & Interactions for SLC35C2P1 Gene

PathCards logo

SuperPathways for SLC35C2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC35C2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC35C2P1 Gene

Drugs & Compounds for SLC35C2P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SLC35C2P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for SLC35C2P1 Gene

No ASD Table

Relevant External Links for SLC35C2P1 Gene

GeneLoc Exon Structure for
SLC35C2P1

No data available for mRNA/cDNA for SLC35C2P1 Gene

Expression for SLC35C2P1 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC35C2P1 Gene

Orthologs for SLC35C2P1 Gene

No data available for Orthologs and Evolution for SLC35C2P1 Gene

Paralogs for SLC35C2P1 Gene

No data available for Paralogs for SLC35C2P1 Gene

Variants for SLC35C2P1 Gene

Additional Variant Information for SLC35C2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC35C2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC35C2P1 Gene

Disorders for SLC35C2P1 Gene

No disorders were found for SLC35C2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC35C2P1 Gene

Publications for SLC35C2P1 Gene

No publications were found for SLC35C2P1 Gene.

No data available for Mastermind for SLC35C2P1 Gene

Products for SLC35C2P1 Gene

Sources for SLC35C2P1 Gene