Aliases for SLC25A51P4 Gene

Aliases for SLC25A51P4 Gene

  • SLC25A51 Pseudogene 4 2 3
  • Mitochondrial Carrier Triple Repeat 1 Pseudogene 3
  • Solute Carrier Family 25 Member 51 Pseudogene 3
  • Novel Solute Carrier Family 25 Pseudogene 5
  • AC090099.1 5

External Ids for SLC25A51P4 Gene

Summaries for SLC25A51P4 Gene

GeneCards Summary for SLC25A51P4 Gene

SLC25A51P4 (SLC25A51 Pseudogene 4) is a Pseudogene.

Additional gene information for SLC25A51P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC25A51P4 Gene

Genomics for SLC25A51P4 Gene

GeneHancer (GH) Regulatory Elements for SLC25A51P4 Gene

Promoters and enhancers for SLC25A51P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J018279 Enhancer 0.7 Ensembl ENCODE 10.9 +72.4 72350 3.4 IKZF1 IKZF2 PKNOX1 DPF2 ELF1 RUNX3 JUNB BATF IRF4 ATF7 GTF2H1 HPS5 SLC25A51P4 ENSG00000254546 LDHA SPTY2D1OS ENSG00000256282 piR-58297-069 lnc-SAA2-3
GH11J018259 Enhancer 0.7 ENCODE 10.9 +50.3 50321 0.1 LCORL HLF RAD21 SP1 CEBPG ZNF644 CEBPA RXRA GATAD2A RXRB piR-57461-029 SAA4 SLC25A51P4 ENSG00000254546 HIGD1AP5 SAAL1 ENSG00000255470 GLTPP1 HPS5 ST13P5
GH11J018133 Enhancer 0.2 Ensembl 11.1 -76.0 -76037 0.6 MRGPRX3 ENSG00000254546 SLC25A51P4 ENSG00000255470 GLTPP1 ENSG00000285562 piR-57195-048
GH11J017454 Enhancer 0.2 dbSUPER 4.4 -754.6 -754572 1 ABCC8 SLC25A51P4 lnc-KCNJ11-4 ENSG00000287898
GH11J018228 Enhancer 0.3 Ensembl ENCODE 0.3 +20.4 20438 1.2 SERGEF SAA4 SLC25A51P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC25A51P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A51P4 Gene

Genomic Locations for SLC25A51P4 Gene
chr11:18,209,138-18,214,562
(GRCh38/hg38)
Size:
5,425 bases
Orientation:
Plus strand
chr11:18,230,685-18,236,109
(GRCh37/hg19)
Size:
5,425 bases
Orientation:
Plus strand

Genomic View for SLC25A51P4 Gene

Genes around SLC25A51P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A51P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A51P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A51P4 Gene

Proteins for SLC25A51P4 Gene

Post-translational modifications for SLC25A51P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A51P4 Gene

Domains & Families for SLC25A51P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC25A51P4 Gene

Function for SLC25A51P4 Gene

Phenotypes From GWAS Catalog for SLC25A51P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A51P4 Gene

Localization for SLC25A51P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A51P4 Gene

Pathways & Interactions for SLC25A51P4 Gene

PathCards logo

SuperPathways for SLC25A51P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A51P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC25A51P4 Gene

Drugs & Compounds for SLC25A51P4 Gene

No Compound Related Data Available

Transcripts for SLC25A51P4 Gene

mRNA/cDNA for SLC25A51P4 Gene

(7) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A51P4 Gene

No ASD Table

Relevant External Links for SLC25A51P4 Gene

GeneLoc Exon Structure for
SLC25A51P4
ECgene alternative splicing isoforms for
SLC25A51P4

Expression for SLC25A51P4 Gene

SOURCE GeneReport for Unigene cluster for SLC25A51P4 Gene:

Hs.446327
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A51P4 Gene

Orthologs for SLC25A51P4 Gene

This gene was present in the common ancestor of animals.

Orthologs for SLC25A51P4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 33
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MCART1 33
  • 34 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 33
  • 34 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Slc25a51 33
  • 33 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 33
  • 30 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 33
  • 28 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 33
  • 27 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii CU638740.1 33
  • 21 (a)
ManyToMany
BX088718.1 33
  • 21 (a)
ManyToMany
zgc:73228 33
  • 21 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG7943 33
  • 13 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea T20D3.5 33
  • 7 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 33
  • 16 (a)
OneToMany
Species where no ortholog for SLC25A51P4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for SLC25A51P4 Gene

ENSEMBL:
Gene Tree for SLC25A51P4 (if available)
TreeFam:
Gene Tree for SLC25A51P4 (if available)

Paralogs for SLC25A51P4 Gene

No data available for Paralogs for SLC25A51P4 Gene

Variants for SLC25A51P4 Gene

Sequence variations from dbSNP and Humsavar for SLC25A51P4 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000963202 -- 18,213,267(+) A/G genic_downstream_transcript_variant, non_coding_transcript_variant
rs1001068727 -- 18,207,849(+) C/T upstream_transcript_variant
rs1001159837 -- 18,209,600(+) A/C/G non_coding_transcript_variant
rs1001246953 -- 18,213,579(+) /G downstream_transcript_variant
rs1002173498 -- 18,208,503(+) G/A/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SLC25A51P4 Gene

Variant ID Type Subtype PubMed ID
nsv975156 CNV duplication 23825009

Additional Variant Information for SLC25A51P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A51P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SLC25A51P4 Gene

Disorders for SLC25A51P4 Gene

No disorders were found for SLC25A51P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC25A51P4 Gene

Publications for SLC25A51P4 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for SLC25A51P4 Gene

Products for SLC25A51P4 Gene

Sources for SLC25A51P4 Gene