Aliases for SLC25A5-AS1 Gene

Subcategory (RNA class) for SLC25A5-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for SLC25A5-AS1 Gene

  • SLC25A5 Antisense RNA 1 2 3 5
  • SLC25A5 Antisense RNA 1 (Non-Protein Coding) 2 3
  • SLC25A5-AS1 2 168
  • NONHSAG055187 92
  • HSALNG0139763 167

External Ids for SLC25A5-AS1 Gene

Previous GeneCards Identifiers for SLC25A5-AS1 Gene

  • GC0XM118601
  • GC0XM119466

Summaries for SLC25A5-AS1 Gene

GeneCards Summary for SLC25A5-AS1 Gene

SLC25A5-AS1 (SLC25A5 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SLC25A5-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC25A5-AS1 Gene

Genomics for SLC25A5-AS1 Gene

GeneHancer (GH) Regulatory Elements for SLC25A5-AS1 Gene

Promoters and enhancers for SLC25A5-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC25A5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A5-AS1 Gene

Genomic Locations for SLC25A5-AS1 Gene
chrX:119,444,039-119,469,128
(GRCh38/hg38)
Size:
25,090 bases
Orientation:
Minus strand
chrX:118,599,996-118,603,083
(GRCh37/hg19)
Size:
3,088 bases
Orientation:
Minus strand

Genomic View for SLC25A5-AS1 Gene

Genes around SLC25A5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A5-AS1 Gene

Proteins for SLC25A5-AS1 Gene

Post-translational modifications for SLC25A5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A5-AS1 Gene

Domains & Families for SLC25A5-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC25A5-AS1 Gene

Function for SLC25A5-AS1 Gene

Phenotypes From GWAS Catalog for SLC25A5-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A5-AS1 Gene

Localization for SLC25A5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A5-AS1 Gene

Pathways & Interactions for SLC25A5-AS1 Gene

PathCards logo

SuperPathways for SLC25A5-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SLC25A5-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC25A5-AS1 Gene

Drugs & Compounds for SLC25A5-AS1 Gene

No Compound Related Data Available

Transcripts for SLC25A5-AS1 Gene

mRNA/cDNA for SLC25A5-AS1 Gene

20 RNACentral transcripts :
3 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
15 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A5-AS1 Gene

No ASD Table

Relevant External Links for SLC25A5-AS1 Gene

GeneLoc Exon Structure for
SLC25A5-AS1

Expression for SLC25A5-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC25A5-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SLC25A5-AS1

SOURCE GeneReport for Unigene cluster for SLC25A5-AS1 Gene:

Hs.714405
genes like me logo Genes that share expression patterns with SLC25A5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A5-AS1 Gene

Orthologs for SLC25A5-AS1 Gene

Evolution for SLC25A5-AS1 Gene

ENSEMBL:
Gene Tree for SLC25A5-AS1 (if available)
TreeFam:
Gene Tree for SLC25A5-AS1 (if available)

No data available for Orthologs for SLC25A5-AS1 Gene

Paralogs for SLC25A5-AS1 Gene

No data available for Paralogs for SLC25A5-AS1 Gene

Variants for SLC25A5-AS1 Gene

Additional dbSNP identifiers (rs#s) for SLC25A5-AS1 Gene

Additional Variant Information for SLC25A5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A5-AS1 Gene

Disorders for SLC25A5-AS1 Gene

Additional Disease Information for SLC25A5-AS1

No disorders were found for SLC25A5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC25A5-AS1 Gene

Publications for SLC25A5-AS1 Gene

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 54

Products for SLC25A5-AS1 Gene

Sources for SLC25A5-AS1 Gene