Aliases for SLC25A39P1 Gene

Aliases for SLC25A39P1 Gene

  • Solute Carrier Family 25 Member 39 Pseudogene 1 2 3 5

External Ids for SLC25A39P1 Gene

Summaries for SLC25A39P1 Gene

GeneCards Summary for SLC25A39P1 Gene

SLC25A39P1 (Solute Carrier Family 25 Member 39 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A39P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC25A39P1 Gene

Genomics for SLC25A39P1 Gene

GeneHancer (GH) Regulatory Elements for SLC25A39P1 Gene

Promoters and enhancers for SLC25A39P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J202782 Enhancer 0.5 Ensembl 0.4 -12.9 -12852 1.8 SREBF1 ZNF362 ZNF18 CEBPB ZNF335 ZNF664 ZBTB33 KDM5B PCAT6 MGAT4EP SLC25A39P1 LOC100506672 lnc-SYT2-3
GH01J202781 Enhancer 0.5 Ensembl 0.4 -14.5 -14451 1 ZNF362 ARNT OSR2 ZNF335 PRDM6 SLC25A39P1 LOC100506672 KDM5B lnc-SYT2-3
GH01J202784 Enhancer 0.3 Ensembl 0.4 -10.3 -10251 3 MAFK ZNF664 PCAT6 KDM5B MGAT4EP SLC25A39P1 LOC100506672 lnc-SYT2-3
GH01J202770 Enhancer 0.4 Ensembl 0.3 -25.6 -25551 0.4 SCRT2 CEBPB CEBPG KDM5B PCAT6 MGAT4EP RABIF LOC100506672 SLC25A39P1
GH01J202774 Enhancer 0.3 Ensembl 0.3 -21.0 -20951 0.4 ZNF316 EMSY KDM5B TMEM183A PCAT6 LOC100506672 SLC25A39P1 lnc-SYT2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC25A39P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A39P1 Gene

Genomic Locations for SLC25A39P1 Gene
chr1:202,795,952-202,797,291
(GRCh38/hg38)
Size:
1,340 bases
Orientation:
Plus strand
chr1:202,765,158-202,766,222
(GRCh37/hg19)
Size:
1,065 bases
Orientation:
Plus strand

Genomic View for SLC25A39P1 Gene

Genes around SLC25A39P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A39P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A39P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A39P1 Gene

Proteins for SLC25A39P1 Gene

Post-translational modifications for SLC25A39P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A39P1 Gene

Domains & Families for SLC25A39P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC25A39P1 Gene

Function for SLC25A39P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A39P1 Gene

Localization for SLC25A39P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A39P1 Gene

Pathways & Interactions for SLC25A39P1 Gene

PathCards logo

SuperPathways for SLC25A39P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A39P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC25A39P1 Gene

Drugs & Compounds for SLC25A39P1 Gene

No Compound Related Data Available

Transcripts for SLC25A39P1 Gene

mRNA/cDNA for SLC25A39P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A39P1 Gene

No ASD Table

Relevant External Links for SLC25A39P1 Gene

GeneLoc Exon Structure for
SLC25A39P1
ECgene alternative splicing isoforms for
SLC25A39P1

Expression for SLC25A39P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC25A39P1 Gene

mRNA differential expression in normal tissues according to GTEx for SLC25A39P1 Gene

This gene is overexpressed in Testis (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of SLC25A39P1 Gene:

SLC25A39P1
genes like me logo Genes that share expression patterns with SLC25A39P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A39P1 Gene

Orthologs for SLC25A39P1 Gene

Evolution for SLC25A39P1 Gene

ENSEMBL:
Gene Tree for SLC25A39P1 (if available)
TreeFam:
Gene Tree for SLC25A39P1 (if available)

No data available for Orthologs for SLC25A39P1 Gene

Paralogs for SLC25A39P1 Gene

No data available for Paralogs for SLC25A39P1 Gene

Variants for SLC25A39P1 Gene

Additional Variant Information for SLC25A39P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A39P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A39P1 Gene

Disorders for SLC25A39P1 Gene

No disorders were found for SLC25A39P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC25A39P1 Gene

Publications for SLC25A39P1 Gene

No publications were found for SLC25A39P1 Gene.

Products for SLC25A39P1 Gene

Sources for SLC25A39P1 Gene