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Aliases for SLC25A38P1 Gene

Aliases for SLC25A38P1 Gene

  • Solute Carrier Family 25 Member 38 Pseudogene 1 2 3 5

External Ids for SLC25A38P1 Gene

Summaries for SLC25A38P1 Gene

GeneCards Summary for SLC25A38P1 Gene

SLC25A38P1 (Solute Carrier Family 25 Member 38 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A38P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SLC25A38P1 Gene

Genomics for SLC25A38P1 Gene

GeneHancer (GH) Regulatory Elements for SLC25A38P1 Gene

Promoters and enhancers for SLC25A38P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I172744 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.8 -2.2 -2153 2.7 HDGF PKNOX1 ATF1 CLOCK FOXA2 ARNT NEUROD1 IRF4 TCF12 ZNF766 ENSG00000224228 SLC25A38P1 FASLG
GH01I172717 Enhancer 1.2 Ensembl ENCODE 0.3 -29.5 -29522 2.8 PKNOX1 CLOCK ATF1 FOXA2 MLX ETS1 TCF12 ZNF766 ARID2 ZNF143 PIGC ENSG00000224228 METTL13 RNU6-693P FASLG SUCO C1orf105 SLC25A38P1
GH01I172658 Promoter/Enhancer 1.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -88.0 -88040 3.1 EGR1 ETV1 ZBTB33 FOXA1 FASLG SUCO SLC25A38P1
GH01I172662 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -84.9 -84882 2.2 PKNOX1 SMAD1 NFIB FEZF1 ZBTB40 TCF12 SCRT2 ETV6 FOS IKZF2 FASLG SUCO METTL13 SLC25A38P1
GH01I172696 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -49.2 -49203 5.4 SRF TSC22D4 GABPA FOSL1 JUND ID3 ETV6 NR2C2 FASLG SUCO SLC25A38P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SLC25A38P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SLC25A38P1 Gene

Genomic Locations for SLC25A38P1 Gene
chr1:172,748,252-172,750,171
(GRCh38/hg38)
Size:
1,920 bases
Orientation:
Plus strand
chr1:172,717,392-172,719,311
(GRCh37/hg19)

Genomic View for SLC25A38P1 Gene

Genes around SLC25A38P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A38P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A38P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A38P1 Gene

Proteins for SLC25A38P1 Gene

Post-translational modifications for SLC25A38P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A38P1 Gene

Domains & Families for SLC25A38P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SLC25A38P1 Gene

Function for SLC25A38P1 Gene

Phenotypes From GWAS Catalog for SLC25A38P1 Gene

Phenotypes for SLC25A38P1 Gene

GenomeRNAi human phenotypes for SLC25A38P1:
genes like me logo Genes that share phenotypes with SLC25A38P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A38P1 Gene

Localization for SLC25A38P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A38P1 Gene

Pathways & Interactions for SLC25A38P1 Gene

SuperPathways for SLC25A38P1 Gene

No Data Available

Interacting Proteins for SLC25A38P1 Gene

Gene Ontology (GO) - Biological Process for SLC25A38P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SLC25A38P1 Gene

Drugs & Compounds for SLC25A38P1 Gene

No Compound Related Data Available

Transcripts for SLC25A38P1 Gene

mRNA/cDNA for SLC25A38P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A38P1 Gene

No ASD Table

Relevant External Links for SLC25A38P1 Gene

GeneLoc Exon Structure for
SLC25A38P1
ECgene alternative splicing isoforms for
SLC25A38P1

Expression for SLC25A38P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SLC25A38P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SLC25A38P1 Gene:

SLC25A38P1
genes like me logo Genes that share expression patterns with SLC25A38P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A38P1 Gene

Orthologs for SLC25A38P1 Gene

Evolution for SLC25A38P1 Gene

ENSEMBL:
Gene Tree for SLC25A38P1 (if available)
TreeFam:
Gene Tree for SLC25A38P1 (if available)

No data available for Orthologs for SLC25A38P1 Gene

Paralogs for SLC25A38P1 Gene

No data available for Paralogs for SLC25A38P1 Gene

Variants for SLC25A38P1 Gene

Additional Variant Information for SLC25A38P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A38P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A38P1 Gene

Disorders for SLC25A38P1 Gene

No disorders were found for SLC25A38P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC25A38P1 Gene

Publications for SLC25A38P1 Gene

  1. Multiple common variants for celiac disease influencing immune gene expression. (PMID: 20190752) Dubois PC … van Heel DA (Nature genetics 2010) 3 58

Products for SLC25A38P1 Gene

Sources for SLC25A38P1 Gene

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