SLC25A24P1 Gene (Pseudogene)

SLC25A24 Pseudogene 1

GC01P108272
GIFtS:
5
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Aliases for SLC25A24P1 Gene

Aliases for SLC25A24P1 Gene

  • SLC25A24 Pseudogene 1 2 3 5
  • SLC25A24P1 5

External Ids for SLC25A24P1 Gene

Previous GeneCards Identifiers for SLC25A24P1 Gene

  • GC01P108819

Summaries for SLC25A24P1 Gene

GeneCards Summary for SLC25A24P1 Gene

SLC25A24P1 (SLC25A24 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A24P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC25A24P1 Gene

Genomics for SLC25A24P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SLC25A24P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J108274 Promoter 0.3 Ensembl 600.7 +1.7 1657 0.8 ENSG00000238122 SLC25A24P1 lnc-NBPF6-8 NBPF4 piR-57094-001 NBPF6
GH01J108272 Promoter 0.3 Ensembl 600.7 +0.3 258 1.6 ENSG00000238122 SLC25A24P1 lnc-NBPF6-8 NBPF4 NBPF6
GH01J108327 Enhancer 0.6 ENCODE 0.2 +55.0 55011 0.2 CTCF REST SOX6 NFE2 FOSL1 MAFG NFIC RAD21 MAFK SKIL piR-48821-002 piR-30897-001 SLC25A24P1 lnc-NBPF6-8 NBPF4 NBPF6
GH01J108260 Enhancer 0.2 Ensembl 0.4 -11.6 -11642 2.2 piR-58483-001 ENSG00000238122 SLC25A24P1 lnc-NBPF6-8 NBPF4 NBPF6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC25A24P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SLC25A24P1 Gene

Genomic Locations for SLC25A24P1 Gene
chr1:108,272,943-108,337,853
(GRCh38/hg38)
Size:
64,911 bases
Orientation:
Plus strand
chr1:108,815,565-108,918,572
(GRCh37/hg19)
Size:
103,008 bases
Orientation:
Plus strand

Genomic View for SLC25A24P1 Gene

Genes around SLC25A24P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A24P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A24P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SLC25A24P1 Gene

Proteins for SLC25A24P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SLC25A24P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A24P1 Gene

Domains & Families for SLC25A24P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC25A24P1 Gene

Function for SLC25A24P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A24P1 Gene

Localization for SLC25A24P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A24P1 Gene

Pathways & Interactions for SLC25A24P1 Gene

PathCards logo

SuperPathways for SLC25A24P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A24P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC25A24P1 Gene

Drugs & Compounds for SLC25A24P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SLC25A24P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SLC25A24P1 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A24P1 Gene

No ASD Table

Relevant External Links for SLC25A24P1 Gene

GeneLoc Exon Structure for
SLC25A24P1

Expression for SLC25A24P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC25A24P1 Gene

mRNA expression in normal human tissues for SLC25A24P1 Gene
mRNA expression by GTEx for SLC25A24P1 Gene

mRNA differential expression in normal tissues according to GTEx for SLC25A24P1 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x14.9), Testis (x14.0), and Brain - Caudate (basal ganglia) (x8.0).
genes like me logo Genes that share expression patterns with SLC25A24P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A24P1 Gene

Orthologs for SLC25A24P1 Gene

Evolution for SLC25A24P1 Gene

ENSEMBL:
Gene Tree for SLC25A24P1 (if available)
TreeFam:
Gene Tree for SLC25A24P1 (if available)

No data available for Orthologs for SLC25A24P1 Gene

Paralogs for SLC25A24P1 Gene

No data available for Paralogs for SLC25A24P1 Gene

Variants for SLC25A24P1 Gene

Additional Variant Information for SLC25A24P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A24P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A24P1 Gene

Disorders for SLC25A24P1 Gene

No disorders were found for SLC25A24P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SLC25A24P1 Gene

Publications for SLC25A24P1 Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3

No data available for Mastermind for SLC25A24P1 Gene

Products for SLC25A24P1 Gene

Sources for SLC25A24P1 Gene