Aliases for SLC25A20P1 Gene

Aliases for SLC25A20P1 Gene

  • Solute Carrier Family 25 Member 20 Pseudogene 1 2 3 5
  • Solute Carrier Family 25 (Carnitine/Acylcarnitine Translocase), Member 20 Pseudogene 1 2 3
  • Solute Carrier Family 25 (Carnitine/Acylcarnitine Translocase), Member 20 Pseudogene 2
  • SLC25A20P1 5
  • SLC25A20P 3
  • CACTP 3

External Ids for SLC25A20P1 Gene

Previous HGNC Symbols for SLC25A20P1 Gene

  • CACTP
  • SLC25A20P

Previous GeneCards Identifiers for SLC25A20P1 Gene

  • GC06P052114
  • GC06P051942

Summaries for SLC25A20P1 Gene

GeneCards Summary for SLC25A20P1 Gene

SLC25A20P1 (Solute Carrier Family 25 Member 20 Pseudogene 1) is a Pseudogene.

Additional gene information for SLC25A20P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SLC25A20P1 Gene

Genomics for SLC25A20P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SLC25A20P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J052388 Enhancer 1.7 VISTA FANTOM5 ENCODE dbSUPER 10.2 +143.8 143817 3.7 SP1 GATAD2A TFE3 LEF1 IKZF1 NFKBIZ RCOR2 BACH1 JUND PRDM1 EFHC1 PAQR8 MCM3 IL17F SLC25A20P1 lnc-IL17A-4 L13714-387 lnc-MCM3-3 TRAM2
GH06J052150 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -91.0 -90997 6 SP1 CREB1 ZNF512 JUND PKNOX1 IKZF2 RCOR1 EP300 SCRT2 RELA LINCMD1 IL17F SLC25A20P1 IL17A PKHD1 MCM3 PAQR8
GH06J052396 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.3 +152.9 152850 4.8 GATAD2A CTCF RFX1 IKZF1 RCOR2 PRDM1 ZNF143 RXRB REST RAD21 lnc-IL17A-5 MCM3 EFHC1 PAQR8 SLC25A20P1 IL17F piR-38214 lnc-MCM3-3 TRAM2
GH06J052535 Enhancer 1.2 ENCODE dbSUPER 9.6 +296.0 296029 13.3 SP1 GATAD2A PRDM10 ZNF629 TFE3 SOX13 NFKBIZ RCOR2 JUND FOXA1 LOC107986603 EFHC1 TRAM2-AS1 TRAM2 MCM3 IL17F SLC25A20P1 PAQR8 ENSG00000216775 piR-51671-069
GH06J052295 Enhancer 1.1 Ensembl ENCODE dbSUPER 9.9 +50.5 50527 3 SP1 POLR2A BACH1 RELA IKZF2 TRIM22 PKNOX1 EED DPF2 RELB EFHC1 IL17F SLC25A20P1 piR-56133-196 MCM3 PAQR8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SLC25A20P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SLC25A20P1 Gene

Genomic Locations for SLC25A20P1 Gene
chr6:52,246,374-52,248,104
(GRCh38/hg38)
Size:
1,731 bases
Orientation:
Plus strand
chr6:52,111,169-52,112,902
(GRCh37/hg19)
Size:
1,734 bases
Orientation:
Plus strand

Genomic View for SLC25A20P1 Gene

Genes around SLC25A20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SLC25A20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SLC25A20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SLC25A20P1 Gene

Proteins for SLC25A20P1 Gene

Post-translational modifications for SLC25A20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SLC25A20P1 Gene

Domains & Families for SLC25A20P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SLC25A20P1 Gene

Function for SLC25A20P1 Gene

Phenotypes From GWAS Catalog for SLC25A20P1 Gene

Phenotypes for SLC25A20P1 Gene

GenomeRNAi human phenotypes for SLC25A20P1:
genes like me logo Genes that share phenotypes with SLC25A20P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SLC25A20P1 Gene

Localization for SLC25A20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SLC25A20P1 Gene

Pathways & Interactions for SLC25A20P1 Gene

PathCards logo

SuperPathways for SLC25A20P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SLC25A20P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SLC25A20P1 Gene

Drugs & Compounds for SLC25A20P1 Gene

No Compound Related Data Available

Transcripts for SLC25A20P1 Gene

mRNA/cDNA for SLC25A20P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SLC25A20P1 Gene

No ASD Table

Relevant External Links for SLC25A20P1 Gene

GeneLoc Exon Structure for
SLC25A20P1

Expression for SLC25A20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SLC25A20P1 Gene

genes like me logo Genes that share expression patterns with SLC25A20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SLC25A20P1 Gene

Orthologs for SLC25A20P1 Gene

Evolution for SLC25A20P1 Gene

ENSEMBL:
Gene Tree for SLC25A20P1 (if available)
TreeFam:
Gene Tree for SLC25A20P1 (if available)

No data available for Orthologs for SLC25A20P1 Gene

Paralogs for SLC25A20P1 Gene

No data available for Paralogs for SLC25A20P1 Gene

Variants for SLC25A20P1 Gene

Additional Variant Information for SLC25A20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SLC25A20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SLC25A20P1 Gene

Disorders for SLC25A20P1 Gene

Additional Disease Information for SLC25A20P1

Genetic Association Database
(GAD)

No disorders were found for SLC25A20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SLC25A20P1 Gene

Publications for SLC25A20P1 Gene

  1. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41

Products for SLC25A20P1 Gene

Sources for SLC25A20P1 Gene