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Aliases for SINHCAFP3 Gene

Subcategory (RNA class) for SINHCAFP3 Gene

lncRNA

Aliases for SINHCAFP3 Gene

  • SINHCAF Pseudogene 3 2 3 5
  • Family With Sequence Similarity 60 Member D, Pseudogene 2 3
  • Family With Sequence Similarity 60, Member A Pseudogene 3
  • Family With Sequence Similarity 60, Member D Pseudogene 2
  • FAM60DP 3

External Ids for SINHCAFP3 Gene

ORGUL Members for SINHCAFP3 Gene

Previous HGNC Symbols for SINHCAFP3 Gene

  • FAM60DP

Summaries for SINHCAFP3 Gene

GeneCards Summary for SINHCAFP3 Gene

SINHCAFP3 (SINHCAF Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SINHCAFP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SINHCAFP3 Gene

Genomics for SINHCAFP3 Gene

GeneHancer (GH) Regulatory Elements for SINHCAFP3 Gene

Promoters and enhancers for SINHCAFP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J023639 Enhancer 0.5 Ensembl 0.7 -4.1 -4094 0.4 BACH1 MAFK ZNF316 NFE2 MAFG CEBPB EMSY SINHCAFP3 GC08M023649
GH08J023605 Enhancer 0.6 Ensembl ENCODE 0.3 +29.4 29366 1.6 GATA3 IKZF1 EGR2 SLC25A37 RNU4-71P SINHCAFP3
GH08J023629 Enhancer 0.4 Ensembl 0.4 +6.0 6006 0.2 ELF1 BRD4 NKX3-1 SLC25A37 SINHCAFP3 RNU4-71P
GH08J023622 Enhancer 0.2 Ensembl 0.4 +13.1 13106 0.4 SLC25A37 SINHCAFP3 RNU4-71P
GH08J023611 Enhancer 0.2 Ensembl 0.3 +20.7 20706 6.4 SLC25A37 NKX3-1 RNU4-71P SINHCAFP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SINHCAFP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SINHCAFP3 Gene

Genomic Locations for SINHCAFP3 Gene
chr8:23,634,867-23,635,507
(GRCh38/hg38)
Size:
641 bases
Orientation:
Minus strand
chr8:23,492,380-23,493,020
(GRCh37/hg19)
Size:
641 bases
Orientation:
Minus strand

Genomic View for SINHCAFP3 Gene

Genes around SINHCAFP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SINHCAFP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SINHCAFP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SINHCAFP3 Gene

Proteins for SINHCAFP3 Gene

Post-translational modifications for SINHCAFP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SINHCAFP3 Gene

Domains & Families for SINHCAFP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SINHCAFP3 Gene

Function for SINHCAFP3 Gene

Phenotypes From GWAS Catalog for SINHCAFP3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SINHCAFP3 Gene

Localization for SINHCAFP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SINHCAFP3 Gene

Pathways & Interactions for SINHCAFP3 Gene

PathCards logo

SuperPathways for SINHCAFP3 Gene

No Data Available

Interacting Proteins for SINHCAFP3 Gene

Gene Ontology (GO) - Biological Process for SINHCAFP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SINHCAFP3 Gene

Drugs & Compounds for SINHCAFP3 Gene

No Compound Related Data Available

Transcripts for SINHCAFP3 Gene

mRNA/cDNA for SINHCAFP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SINHCAFP3 Gene

No ASD Table

Relevant External Links for SINHCAFP3 Gene

GeneLoc Exon Structure for
SINHCAFP3
ECgene alternative splicing isoforms for
SINHCAFP3

Expression for SINHCAFP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of SINHCAFP3 Gene:

SINHCAFP3
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SINHCAFP3 Gene

Orthologs for SINHCAFP3 Gene

Evolution for SINHCAFP3 Gene

ENSEMBL:
Gene Tree for SINHCAFP3 (if available)
TreeFam:
Gene Tree for SINHCAFP3 (if available)

No data available for Orthologs for SINHCAFP3 Gene

Paralogs for SINHCAFP3 Gene

No data available for Paralogs for SINHCAFP3 Gene

Variants for SINHCAFP3 Gene

Additional Variant Information for SINHCAFP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SINHCAFP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SINHCAFP3 Gene

Disorders for SINHCAFP3 Gene

No disorders were found for SINHCAFP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SINHCAFP3 Gene

Publications for SINHCAFP3 Gene

No publications were found for SINHCAFP3 Gene.

No data available for External Links for SINHCAFP3 Gene

Products for SINHCAFP3 Gene

Sources for SINHCAFP3 Gene

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