Aliases for SIGLEC28P Gene

Aliases for SIGLEC28P Gene

  • Sialic Acid Binding Ig Like Lectin 28, Pseudogene 2 3
  • Sialic Acid Binding Ig-Like Lectin, Pseudogene 12 2 3
  • Sialic Acid Binding Ig-Like Lectin 28, Pseudogene 2
  • SIGLECP12 3

External Ids for SIGLEC28P Gene

Previous HGNC Symbols for SIGLEC28P Gene

  • SIGLECP12

Previous GeneCards Identifiers for SIGLEC28P Gene

  • GC19M052048

Summaries for SIGLEC28P Gene

GeneCards Summary for SIGLEC28P Gene

SIGLEC28P (Sialic Acid Binding Ig Like Lectin 28, Pseudogene) is a Pseudogene.

Additional gene information for SIGLEC28P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SIGLEC28P Gene

Genomics for SIGLEC28P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SIGLEC28P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J051544 Enhancer 0.3 dbSUPER 250.7 +1.3 1287 1.6 CEBPB SIGLEC28P SIGLEC12 CEACAM18 SIGLEC8 RPL7P51 SIGLEC14 SIGLEC5 SIGLEC6 ZNF175
GH19J051545 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 -3.3 -3288 7.2 TBP MNT IKZF1 SMAD5 HES1 MBD2 BHLHE40 NONO ARNT ZNF395 HSALNG0127226 SIGLEC6 ZNF175 ZNF841 ZNF808 ZNF616 ZNF836 SIGLEC8 SIGLEC14 ZNF350
GH19J051539 Enhancer 0.9 Ensembl dbSUPER 0.7 +3.6 3586 2.2 IKZF1 RELA SKIL ZNF316 NRF1 TFDP1 MAFG TAF7 L3MBTL2 ZMYM3 SIGLEC12 CEACAM18 SIGLEC8 SIGLEC14 SIGLEC5 RPL7P51 SIGLEC28P SIGLEC6 ZNF175
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SIGLEC28P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SIGLEC28P Gene

Latest Assembly
chr19:51,545,326-51,546,087
(GRCh38/hg38)
Size:
762 bases
Orientation:
Minus strand

Previous Assembly
chr19:52,048,579-52,049,340
(GRCh37/hg19 by Entrez Gene)
Size:
762 bases
Orientation:
Minus strand

Genomic View for SIGLEC28P Gene

Genes around SIGLEC28P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIGLEC28P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIGLEC28P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SIGLEC28P Gene

Proteins for SIGLEC28P Gene

Post-translational modifications for SIGLEC28P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIGLEC28P Gene

Domains & Families for SIGLEC28P Gene

Gene Families for SIGLEC28P Gene

genes like me logo Genes that share domains with SIGLEC28P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SIGLEC28P Gene

Function for SIGLEC28P Gene

Phenotypes From GWAS Catalog for SIGLEC28P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIGLEC28P Gene

Localization for SIGLEC28P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIGLEC28P Gene

Pathways & Interactions for SIGLEC28P Gene

PathCards logo

SuperPathways for SIGLEC28P Gene

No Data Available

Gene Ontology (GO) - Biological Process for SIGLEC28P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SIGLEC28P Gene

Drugs & Compounds for SIGLEC28P Gene

No Compound Related Data Available

Transcripts for SIGLEC28P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SIGLEC28P Gene

No ASD Table

Relevant External Links for SIGLEC28P Gene

GeneLoc Exon Structure for
SIGLEC28P

No data available for mRNA/cDNA for SIGLEC28P Gene

Expression for SIGLEC28P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SIGLEC28P Gene

genes like me logo Genes that share expression patterns with SIGLEC28P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIGLEC28P Gene

Orthologs for SIGLEC28P Gene

No data available for Orthologs and Evolution for SIGLEC28P Gene

Paralogs for SIGLEC28P Gene

No data available for Paralogs for SIGLEC28P Gene

Variants for SIGLEC28P Gene

Additional Variant Information for SIGLEC28P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIGLEC28P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIGLEC28P Gene

Disorders for SIGLEC28P Gene

Additional Disease Information for SIGLEC28P

Genetic Association Database
(GAD)

No disorders were found for SIGLEC28P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SIGLEC28P Gene

Publications for SIGLEC28P Gene

  1. A second uniquely human mutation affecting sialic acid biology. (PMID: 11546777) Angata T … Varki A (The Journal of biological chemistry 2001) 2 3

No data available for Mastermind for SIGLEC28P Gene

Products for SIGLEC28P Gene

Sources for SIGLEC28P Gene