SIGLEC27P Gene (Pseudogene)

Sialic Acid Binding Ig Like Lectin 27, Pseudogene

GC19P051509
GIFtS:
6
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Aliases for SIGLEC27P Gene

Aliases for SIGLEC27P Gene

  • Sialic Acid Binding Ig Like Lectin 27, Pseudogene 2 3 5
  • Sialic Acid Binding Ig-Like Lectin, Pseudogene 11 2 3
  • Sialic Acid Binding Ig-Like Lectin 27, Pseudogene 2
  • SIGLECP11 3
  • SIGLEC27P 5

External Ids for SIGLEC27P Gene

Previous HGNC Symbols for SIGLEC27P Gene

  • SIGLECP11

Previous GeneCards Identifiers for SIGLEC27P Gene

  • GC19P052012

Summaries for SIGLEC27P Gene

GeneCards Summary for SIGLEC27P Gene

SIGLEC27P (Sialic Acid Binding Ig Like Lectin 27, Pseudogene) is a Pseudogene.

Additional gene information for SIGLEC27P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SIGLEC27P Gene

Genomics for SIGLEC27P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SIGLEC27P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19J051506 Enhancer 1.1 Ensembl ENCODE 250.7 +0.6 588 6 IKZF1 SMAD5 HES1 MBD2 ARNT ZNF395 REST GTF2E2 CTCF NFATC3 SIGLEC27P lnc-CEACAM18-3 SIGLEC12 ZNF841 SIGLEC14 HSALNG0127222 SIGLEC6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SIGLEC27P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SIGLEC27P Gene

Latest Assembly
chr19:51,508,403-51,509,311
(GRCh38/hg38)
Size:
909 bases
Orientation:
Plus strand

Previous Assembly
chr19:52,011,657-52,012,082
(GRCh37/hg19 by Entrez Gene)
Size:
426 bases
Orientation:
Plus strand

chr19:52,011,827-52,012,567
(GRCh37/hg19 by Ensembl)
Size:
741 bases
Orientation:
Plus strand

Genomic View for SIGLEC27P Gene

Genes around SIGLEC27P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIGLEC27P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIGLEC27P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SIGLEC27P Gene

Proteins for SIGLEC27P Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for SIGLEC27P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIGLEC27P Gene

Domains & Families for SIGLEC27P Gene

Gene Families for SIGLEC27P Gene

HGNC:
genes like me logo Genes that share domains with SIGLEC27P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SIGLEC27P Gene

Function for SIGLEC27P Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for SIGLEC27P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIGLEC27P Gene

Localization for SIGLEC27P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIGLEC27P Gene

Pathways & Interactions for SIGLEC27P Gene

PathCards logo

SuperPathways for SIGLEC27P Gene

No Data Available

Gene Ontology (GO) - Biological Process for SIGLEC27P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SIGLEC27P Gene

Drugs & Compounds for SIGLEC27P Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for SIGLEC27P Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for SIGLEC27P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SIGLEC27P Gene

No ASD Table

Relevant External Links for SIGLEC27P Gene

GeneLoc Exon Structure for
SIGLEC27P

Expression for SIGLEC27P Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SIGLEC27P Gene

mRNA expression in normal human tissues for SIGLEC27P Gene
mRNA expression by GTEx for SIGLEC27P Gene
genes like me logo Genes that share expression patterns with SIGLEC27P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIGLEC27P Gene

Orthologs for SIGLEC27P Gene

Evolution for SIGLEC27P Gene

ENSEMBL:
Gene Tree for SIGLEC27P (if available)
TreeFam:
Gene Tree for SIGLEC27P (if available)

No data available for Orthologs for SIGLEC27P Gene

Paralogs for SIGLEC27P Gene

No data available for Paralogs for SIGLEC27P Gene

Variants for SIGLEC27P Gene

Additional Variant Information for SIGLEC27P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIGLEC27P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIGLEC27P Gene

Disorders for SIGLEC27P Gene

No disorders were found for SIGLEC27P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIGLEC27P Gene

Publications for SIGLEC27P Gene

  1. A second uniquely human mutation affecting sialic acid biology. (PMID: 11546777) Angata T … Varki A (The Journal of biological chemistry 2001) 2 3

ExternalLinks

View latest publications for SIGLEC27P gene in Mastermind

Products for SIGLEC27P Gene

Sources for SIGLEC27P Gene