Aliases for SIGLEC20P Gene

Aliases for SIGLEC20P Gene

  • Sialic Acid Binding Ig Like Lectin 20, Pseudogene 2 3 5
  • Sialic Acid Binding Ig-Like Lectin, Pseudogene 4 2 3
  • Sialic Acid Binding Ig-Like Lectin 20, Pseudogene 2
  • Sialic Acid Binding Ig-Like Lectin 8 Pseudogene 3
  • SIGLEC20P 5
  • SIGLECP1 3
  • SIGLECP4 3

External Ids for SIGLEC20P Gene

Previous HGNC Symbols for SIGLEC20P Gene

  • SIGLECP4

Previous GeneCards Identifiers for SIGLEC20P Gene

  • GC19P051687

Summaries for SIGLEC20P Gene

GeneCards Summary for SIGLEC20P Gene

SIGLEC20P (Sialic Acid Binding Ig Like Lectin 20, Pseudogene) is a Pseudogene.

Additional gene information for SIGLEC20P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SIGLEC20P Gene

Genomics for SIGLEC20P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SIGLEC20P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J051182 Promoter 0.6 Ensembl 255.7 -1.8 -1845 1.4 MAX POLR2A EZH2 SIGLEC20P LOC101928517 HSALNG0127189 CD33 SIGLEC7
GH19J051184 Promoter 0.3 Ensembl 255.7 -0.1 -145 0.8 SIGLEC20P HSALNG0127189 LOC101928517 CD33 SIGLEC7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SIGLEC20P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SIGLEC20P Gene

Latest Assembly
chr19:51,184,746-51,190,809
(GRCh38/hg38)
Size:
6,064 bases
Orientation:
Plus strand

Previous Assembly
chr19:51,688,002-51,688,463
(GRCh37/hg19 by Entrez Gene)
Size:
462 bases
Orientation:
Plus strand

chr19:51,688,161-51,694,065
(GRCh37/hg19 by Ensembl)
Size:
5,905 bases
Orientation:
Plus strand

Genomic View for SIGLEC20P Gene

Genes around SIGLEC20P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIGLEC20P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIGLEC20P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SIGLEC20P Gene

Proteins for SIGLEC20P Gene

Post-translational modifications for SIGLEC20P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIGLEC20P Gene

Domains & Families for SIGLEC20P Gene

Gene Families for SIGLEC20P Gene

genes like me logo Genes that share domains with SIGLEC20P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SIGLEC20P Gene

Function for SIGLEC20P Gene

Phenotypes From GWAS Catalog for SIGLEC20P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIGLEC20P Gene

Localization for SIGLEC20P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIGLEC20P Gene

Pathways & Interactions for SIGLEC20P Gene

PathCards logo

SuperPathways for SIGLEC20P Gene

No Data Available

Gene Ontology (GO) - Biological Process for SIGLEC20P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SIGLEC20P Gene

Drugs & Compounds for SIGLEC20P Gene

No Compound Related Data Available

Transcripts for SIGLEC20P Gene

mRNA/cDNA for SIGLEC20P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SIGLEC20P Gene

No ASD Table

Relevant External Links for SIGLEC20P Gene

GeneLoc Exon Structure for
SIGLEC20P

Expression for SIGLEC20P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SIGLEC20P Gene

mRNA differential expression in normal tissues according to GTEx for SIGLEC20P Gene

This gene is overexpressed in Testis (x43.0) and Whole Blood (x6.4).
genes like me logo Genes that share expression patterns with SIGLEC20P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIGLEC20P Gene

Orthologs for SIGLEC20P Gene

Evolution for SIGLEC20P Gene

ENSEMBL:
Gene Tree for SIGLEC20P (if available)
TreeFam:
Gene Tree for SIGLEC20P (if available)

No data available for Orthologs for SIGLEC20P Gene

Paralogs for SIGLEC20P Gene

No data available for Paralogs for SIGLEC20P Gene

Variants for SIGLEC20P Gene

Additional Variant Information for SIGLEC20P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIGLEC20P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIGLEC20P Gene

Disorders for SIGLEC20P Gene

No disorders were found for SIGLEC20P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIGLEC20P Gene

Publications for SIGLEC20P Gene

  1. A second uniquely human mutation affecting sialic acid biology. (PMID: 11546777) Angata T … Varki A (The Journal of biological chemistry 2001) 2 3
  2. Genomic organization of the siglec gene locus on chromosome 19q13.4 and cloning of two new siglec pseudogenes. (PMID: 11943481) Yousef GM … Diamandis EP (Gene 2002) 3

No data available for Mastermind for SIGLEC20P Gene

Products for SIGLEC20P Gene

Sources for SIGLEC20P Gene