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Aliases for SIGLEC18P Gene
Aliases for SIGLEC18P Gene
External Ids for SIGLEC18P Gene
- HGNC: 15491
- NCBI Entrez Gene: 114184
- Ensembl: ENSG00000268581
Previous HGNC Symbols for SIGLEC18P Gene
- SIGLECP1
Previous GeneCards Identifiers for SIGLEC18P Gene
- GC19P051623
Summaries for SIGLEC18P Gene
GeneCards Summary for SIGLEC18P Gene
SIGLEC18P (Sialic Acid Binding Ig Like Lectin 18, Pseudogene) is a Pseudogene.
Additional gene information for SIGLEC18P Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SIGLEC18P Gene
Genomics for SIGLEC18P Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for SIGLEC18P Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19J051121 | Enhancer | 0.4 | ENCODE dbSUPER | 250.7 | +1.7 | 1669 | 0.2 | SPI1 | SIGLEC18P lnc-SIGLEC9-2 SIGLEC9 CTU1 | |
| GH19J051122 | Enhancer | 0.4 | FANTOM5 dbSUPER | 250.7 | -0.1 | -88 | 0.1 | SIGLEC18P lnc-SIGLEC9-2 SIGLEC9 CTU1 SIGLEC7 SIGLEC10 CD33 SIGLEC8 HSALNG0127179 | ||
| GH19J051120 | Enhancer | 0.4 | FANTOM5 dbSUPER | 250.7 | +0.5 | 527 | 0.2 | SIGLEC18P lnc-SIGLEC9-2 SIGLEC9 SIGLEC10 CD33 CTU1 | ||
| GH19J051119 | Enhancer | 0.3 | FANTOM5 dbSUPER | 250.7 | -0.5 | -492 | 0.1 | SIGLEC18P lnc-SIGLEC9-2 SIGLEC9 SIGLEC7 HSALNG0127179 CTU1 | ||
| GH19J051123 | Promoter/Enhancer | 2 | EPDnew FANTOM5 Ensembl ENCODE dbSUPER | 6.9 | +6.7 | 6651 | 9.6 | MNT IKZF1 HES1 MBD2 CEBPB GABPA FOXA2 VEZF1 MAFF ZEB2 | SIGLEC9 HSALNG0127181 MN297605 ZNF613 ZNF841 ZNF577 POLD1 SIGLEC18P KLK11 C19orf81 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SIGLEC18P on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for SIGLEC18P Gene
Latest Assembly
- chr19:51,119,830-51,122,965
- (GRCh38/hg38)
- Size:
- 3,136 bases
- Orientation:
- Plus strand
Previous Assembly
- chr19:51,623,087-51,623,593
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 507 bases
- Orientation:
- Plus strand
- chr19:51,623,244-51,626,222
- (GRCh37/hg19 by Ensembl)
- Size:
- 2,979 bases
- Orientation:
- Plus strand
Genomic View for SIGLEC18P Gene
Genes around SIGLEC18P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19q13.41 by HGNC
- 19q13.41 by Entrez Gene
- 19q13.41 by Ensembl
SIGLEC18P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SIGLEC18P Gene
Proteins for SIGLEC18P Gene
Post-translational modifications for SIGLEC18P Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SIGLEC18P
- Origene Custom Protein Services for SIGLEC18P
Assay products for research
No data available for DME Specific Peptides for SIGLEC18P Gene
Domains & Families for SIGLEC18P Gene
Gene Families for SIGLEC18P Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SIGLEC18P Gene
Function for SIGLEC18P Gene
Phenotypes From GWAS Catalog for SIGLEC18P Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SIGLEC18P - Starting at $85 >
- * SIGLEC18P CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for SIGLEC18P
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIGLEC18P Gene
Localization for SIGLEC18P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIGLEC18P Gene
Transcripts for SIGLEC18P Gene
mRNA/cDNA for SIGLEC18P Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000602271 909 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SIGLEC18P - Starting at $85 >
- * SIGLEC18P CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for SIGLEC18P
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for SIGLEC18P Gene
- GeneLoc Exon Structure for
- SIGLEC18P
Expression for SIGLEC18P Gene
mRNA differential expression in normal tissues according to GTEx for SIGLEC18P Gene
This gene is overexpressed in Whole Blood (x12.3), Lung (x5.7), and Spleen (x5.6).
Primer products for research
-
OriGene qPCR primer pairs for SIGLEC18P
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIGLEC18P Gene
Orthologs for SIGLEC18P Gene
No data available for Orthologs for SIGLEC18P Gene
Paralogs for SIGLEC18P Gene
No data available for Paralogs for SIGLEC18P Gene
Variants for SIGLEC18P Gene
Additional Variant Information for SIGLEC18P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SIGLEC18P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIGLEC18P Gene
Disorders for SIGLEC18P Gene
No disorders were found for SIGLEC18P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIGLEC18P Gene
Publications for SIGLEC18P Gene
- A second uniquely human mutation affecting sialic acid biology. (PMID: 11546777) Angata T … Varki A (The Journal of biological chemistry 2001) 2 3
Products for SIGLEC18P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SIGLEC18P
- Origene Custom Protein Services for SIGLEC18P
- Browse OriGene Inhibitory RNA Products For SIGLEC18P
- OriGene qPCR primer pairs for SIGLEC18P
- Browse CRISPR knockouts for SIGLEC18P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SIGLEC18P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for SIGLEC18P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for SIGLEC18P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SIGLEC18P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for SIGLEC18P
Sources for SIGLEC18P Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB