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Aliases for SIGLEC18P Gene

Aliases for SIGLEC18P Gene

  • Sialic Acid Binding Ig Like Lectin 18, Pseudogene 2 3 5
  • SIGLEC18P, Sialic Acid Binding Ig-Like Lectin 18, Pseudogene 2 3
  • Sialic Acid Binding Ig-Like Lectin, Pseudogene 1 2 3
  • Sialic Acid Binding Ig-Like Lectin 18, Pseudogene 2
  • Sialic Acid Binding Ig-Like Lectin 12 Pseudogene 3
  • SIGLECP1 3

External Ids for SIGLEC18P Gene

Previous HGNC Symbols for SIGLEC18P Gene

  • SIGLECP1

Previous GeneCards Identifiers for SIGLEC18P Gene

  • GC19P051623

Summaries for SIGLEC18P Gene

GeneCards Summary for SIGLEC18P Gene

SIGLEC18P (Sialic Acid Binding Ig Like Lectin 18, Pseudogene) is a Pseudogene.

Additional gene information for SIGLEC18P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SIGLEC18P Gene

Genomics for SIGLEC18P Gene

GeneHancer (GH) Regulatory Elements for SIGLEC18P Gene

Promoters and enhancers for SIGLEC18P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I051122 Enhancer 0.5 FANTOM5 dbSUPER 550.8 -0.1 -88 0.1 SIGLEC18P SIGLEC9 CTU1 SIGLEC7 SIGLEC10 CD33 SIGLEC8
GH19I051120 Enhancer 0.4 FANTOM5 dbSUPER 550.8 +0.5 527 0.2 SIGLEC18P SIGLEC9 SIGLEC10 C19orf81 CD33
GH19I051119 Enhancer 0.4 FANTOM5 dbSUPER 550.8 -0.5 -492 0.1 SIGLEC18P SIGLEC9 SIGLEC7 CTU1
GH19I051121 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6.9 +6.3 6305 10.3 PKNOX1 ATF1 FOXA2 TCF12 FOS ATF7 RXRA MBD2 MEF2D ATF4 SIGLEC9 ZNF613 ZNF841 ZNF577 POLD1 SIGLEC18P KLK11 CTU1 C19orf81 SIGLEC10
GH19I051114 Enhancer 0.7 ENCODE dbSUPER 0.8 -4.8 -4830 1.6 MITF BATF RUNX3 PRDM1 SIGLEC9 SIGLEC18P CTU1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SIGLEC18P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SIGLEC18P Gene

Genomic Locations for SIGLEC18P Gene
chr19:51,119,830-51,122,965
(GRCh38/hg38)
Size:
3,136 bases
Orientation:
Plus strand
chr19:51,623,087-51,626,222
(GRCh37/hg19)

Genomic View for SIGLEC18P Gene

Genes around SIGLEC18P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SIGLEC18P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SIGLEC18P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SIGLEC18P Gene

Proteins for SIGLEC18P Gene

Post-translational modifications for SIGLEC18P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SIGLEC18P Gene

Domains & Families for SIGLEC18P Gene

Gene Families for SIGLEC18P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SIGLEC18P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SIGLEC18P Gene

Function for SIGLEC18P Gene

Phenotypes From GWAS Catalog for SIGLEC18P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SIGLEC18P Gene

Localization for SIGLEC18P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SIGLEC18P Gene

Pathways & Interactions for SIGLEC18P Gene

SuperPathways for SIGLEC18P Gene

No Data Available

Interacting Proteins for SIGLEC18P Gene

Gene Ontology (GO) - Biological Process for SIGLEC18P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SIGLEC18P Gene

Drugs & Compounds for SIGLEC18P Gene

No Compound Related Data Available

Transcripts for SIGLEC18P Gene

mRNA/cDNA for SIGLEC18P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SIGLEC18P Gene

No ASD Table

Relevant External Links for SIGLEC18P Gene

GeneLoc Exon Structure for
SIGLEC18P
ECgene alternative splicing isoforms for
SIGLEC18P

Expression for SIGLEC18P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SIGLEC18P Gene

mRNA differential expression in normal tissues according to GTEx for SIGLEC18P Gene

This gene is overexpressed in Whole Blood (x12.3), Lung (x5.7), and Spleen (x5.6).

NURSA nuclear receptor signaling pathways regulating expression of SIGLEC18P Gene:

SIGLEC18P
genes like me logo Genes that share expression patterns with SIGLEC18P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SIGLEC18P Gene

Orthologs for SIGLEC18P Gene

Evolution for SIGLEC18P Gene

ENSEMBL:
Gene Tree for SIGLEC18P (if available)
TreeFam:
Gene Tree for SIGLEC18P (if available)

No data available for Orthologs for SIGLEC18P Gene

Paralogs for SIGLEC18P Gene

No data available for Paralogs for SIGLEC18P Gene

Variants for SIGLEC18P Gene

Additional Variant Information for SIGLEC18P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SIGLEC18P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SIGLEC18P Gene

Disorders for SIGLEC18P Gene

No disorders were found for SIGLEC18P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SIGLEC18P Gene

Publications for SIGLEC18P Gene

  1. A second uniquely human mutation affecting sialic acid biology. (PMID: 11546777) Angata T … Varki A (The Journal of biological chemistry 2001) 2 3 58

Products for SIGLEC18P Gene

Sources for SIGLEC18P Gene

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