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SHOC1 (Shortage In Chiasmata 1) is a Protein Coding gene.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003677 | DNA binding | IEA | -- |
GO:0003697 | single-stranded DNA binding | IBA,IDA | 29742103 |
GO:0016787 | hydrolase activity | IEA | -- |
GO:0016887 | ATPase activity | IBA,IDA | 29742103 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000794 | condensed nuclear chromosome | IBA,ISS | -- |
GO:0005694 | chromosome | ISS | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000712 | resolution of meiotic recombination intermediates | ISS | -- |
GO:0007131 | reciprocal meiotic recombination | IEA,ISS | -- |
GO:0051321 | meiotic cell cycle | IEA | -- |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | C9H9orf84 30 |
|
||
C9orf84 31 |
|
OneToOne | |||
Dog (Canis familiaris) |
Mammalia | C11H9orf84 30 |
|
||
C9orf84 31 |
|
OneToOne | |||
Cow (Bos Taurus) |
Mammalia | LOC617568 30 |
|
||
C9orf84 31 |
|
OneToOne | |||
Mouse (Mus musculus) |
Mammalia | AI481877 30 31 |
|
OneToOne | |
Shoc1 17 |
|
||||
Rat (Rattus norvegicus) |
Mammalia | LOC686050 30 |
|
||
Oppossum (Monodelphis domestica) |
Mammalia | C9orf84 31 |
|
OneToOne | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | C9orf84 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | CZH9orf84 30 |
|
||
C9orf84 31 |
|
OneToOne | |||
Lizard (Anolis carolinensis) |
Reptilia | C9orf84 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | LOC100487050 30 |
|
SNP ID | Clinical significance and condition | Chr 09 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs10981009 | - |
p.Arg1425Cys |
|||
rs10981047 | - |
p.Thr226Ser |
|||
rs11791445 | - |
p.Met734Leu |
|||
rs1322254 | - |
p.Asn1380Lys |
|||
rs1322257 | - |
p.Ile649Thr |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv7700n100 | CNV | gain | 25217958 |
esv1003380 | CNV | deletion | 20482838 |
esv1650763 | CNV | deletion | 17803354 |
esv2420162 | CNV | deletion | 18987734 |
esv2738937 | CNV | deletion | 23290073 |
esv2738938 | CNV | deletion | 23290073 |
esv2761550 | CNV | gain | 21179565 |
nsv1110050 | CNV | deletion | 24896259 |
nsv466486 | CNV | gain | 19166990 |
nsv615193 | CNV | gain | 21841781 |
nsv615194 | CNV | loss | 21841781 |
nsv6667 | CNV | insertion | 18451855 |
nsv831690 | CNV | loss | 17160897 |
No disorders were found for SHOC1 Gene.