SETP3 Gene (Pseudogene)

SET Pseudogene 3

GC17M058475
GIFtS:
7
See more...

Aliases for SETP3 Gene

Aliases for SETP3 Gene

  • SET Pseudogene 3 2 3 5
  • SET Translocation, Pseudogene 3 2 3
  • SET Pseudogene 13 2 3
  • SETP13 3
  • SETP3 5

External Ids for SETP3 Gene

Previous HGNC Symbols for SETP3 Gene

  • SETP13

Previous GeneCards Identifiers for SETP3 Gene

  • GC17U900599
  • GC17M058476

Summaries for SETP3 Gene

GeneCards Summary for SETP3 Gene

SETP3 (SET Pseudogene 3) is a Pseudogene.

Additional gene information for SETP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SETP3 Gene

Genomics for SETP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SETP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J058487 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -10.8 -10779 1.2 CTCF HNRNPL RBFOX2 POLR2A EBF1 MAX ZBTB33 EZH2 HSF5 SETP3 RNF43
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SETP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SETP3 Gene

Genomic Locations for SETP3 Gene
chr17:58,475,991-58,477,102
(GRCh38/hg38)
Size:
1,112 bases
Orientation:
Minus strand

Genomic View for SETP3 Gene

Genes around SETP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SETP3 Gene

Proteins for SETP3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

No data available for DME Specific Peptides for SETP3 Gene

Domains & Families for SETP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SETP3 Gene

Function for SETP3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP3 Gene

Localization for SETP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SETP3 Gene

Pathways & Interactions for SETP3 Gene

PathCards logo

SuperPathways for SETP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SETP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SETP3 Gene

Drugs & Compounds for SETP3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SETP3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SETP3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SETP3 Gene

No ASD Table

Relevant External Links for SETP3 Gene

GeneLoc Exon Structure for
SETP3

Expression for SETP3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SETP3 Gene

mRNA expression in normal human tissues for SETP3 Gene
mRNA expression by GTEx for SETP3 Gene
genes like me logo Genes that share expression patterns with SETP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP3 Gene

Orthologs for SETP3 Gene

Evolution for SETP3 Gene

ENSEMBL:
Gene Tree for SETP3 (if available)
TreeFam:
Gene Tree for SETP3 (if available)

No data available for Orthologs for SETP3 Gene

Paralogs for SETP3 Gene

No data available for Paralogs for SETP3 Gene

Variants for SETP3 Gene

Additional Variant Information for SETP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP3 Gene

Disorders for SETP3 Gene

Additional Disease Information for SETP3

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for SETP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP3 Gene

Publications for SETP3 Gene

No publications were found for SETP3 Gene.

ExternalLinks

View latest publications for SETP3 gene in Mastermind

Products for SETP3 Gene

Sources for SETP3 Gene