Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SETP2 Gene

Aliases for SETP2 Gene

  • SET Pseudogene 2 2 3 5

External Ids for SETP2 Gene

Previous GeneCards Identifiers for SETP2 Gene

  • GC14U900039
  • GC14P049893
  • GC14P049894
  • GC14P050972
  • GC14P051902

Summaries for SETP2 Gene

GeneCards Summary for SETP2 Gene

SETP2 (SET Pseudogene 2) is a Pseudogene.

Additional gene information for SETP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SETP2 Gene

Genomics for SETP2 Gene

GeneHancer (GH) Regulatory Elements for SETP2 Gene

Promoters and enhancers for SETP2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I051429 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.2 -5237 2.4 PKNOX1 FOXA2 RXRA MAX EBF1 RAD21 FOXA1 GABPA JUND ATF3 TRIM9 SETP2 GC14P051436 LINC02310
GH14I051441 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +7.2 7234 4.2 ZNF335 CTCF SP1 JUND FOSL2 FOS RAD21 PRDM1 FRMD6 RNU6-301P GC14P051436 SETP2
GH14I051448 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +13.2 13220 1.8 RXRA MAX REST RAD21 NR2F2 YY1 JUND POLR2A ATF3 HNF4G RNU6-1291P FRMD6 ABHD12B GC14P051436 SETP2
GH14I051423 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -11.3 -11290 2 RXRA MAX HNF4A RAD21 NR2F2 FRMD6 SETP2 GC14P051436 LINC02310
GH14I051419 Enhancer 0.6 ENCODE 0.4 -16.1 -16060 1.1 SRF USF2 REST MNT ZBTB40 ZNF354B ZNF507 GABPA MITF RAD51 FRMD6 SAV1 MAP4K5 SETP2 GC14P051436 LINC02310
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SETP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SETP2 Gene

Genomic Locations for SETP2 Gene
3,276 bases
Plus strand

Genomic View for SETP2 Gene

Genes around SETP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SETP2 Gene

Proteins for SETP2 Gene

Post-translational modifications for SETP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP2 Gene

Domains & Families for SETP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SETP2 Gene

Function for SETP2 Gene

Phenotypes From GWAS Catalog for SETP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP2 Gene

Localization for SETP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SETP2 Gene

Pathways & Interactions for SETP2 Gene

SuperPathways for SETP2 Gene

No Data Available

Interacting Proteins for SETP2 Gene

Gene Ontology (GO) - Biological Process for SETP2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SETP2 Gene

Drugs & Compounds for SETP2 Gene

No Compound Related Data Available

Transcripts for SETP2 Gene

mRNA/cDNA for SETP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SETP2 Gene

No ASD Table

Relevant External Links for SETP2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SETP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SETP2 Gene

mRNA differential expression in normal tissues according to GTEx for SETP2 Gene

This gene is overexpressed in Uterus (x17.6), Cervix - Ectocervix (x11.0), Fallopian Tube (x7.5), and Cervix - Endocervix (x7.1).

NURSA nuclear receptor signaling pathways regulating expression of SETP2 Gene:

genes like me logo Genes that share expression patterns with SETP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP2 Gene

Orthologs for SETP2 Gene

Evolution for SETP2 Gene

Gene Tree for SETP2 (if available)
Gene Tree for SETP2 (if available)

No data available for Orthologs for SETP2 Gene

Paralogs for SETP2 Gene

No data available for Paralogs for SETP2 Gene

Variants for SETP2 Gene

Additional Variant Information for SETP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP2 Gene

Disorders for SETP2 Gene

Additional Disease Information for SETP2

Genetic Association Database

No disorders were found for SETP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP2 Gene

Publications for SETP2 Gene

  1. Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease. (PMID: 21116278) Furney SJ … AddNeuroMed Consortium (Molecular psychiatry 2011) 44 58

Products for SETP2 Gene

Sources for SETP2 Gene

Loading form....