SETP10 Gene (Pseudogene)

SET Pseudogene 10

GC01P179183
GIFtS:
7
See more...

Aliases for SETP10 Gene

Aliases for SETP10 Gene

  • SET Pseudogene 10 2 3 5
  • SET Nuclear Oncogene Pseudogene 3
  • SETP10 5

External Ids for SETP10 Gene

Previous GeneCards Identifiers for SETP10 Gene

  • GC01P179154

Summaries for SETP10 Gene

GeneCards Summary for SETP10 Gene

SETP10 (SET Pseudogene 10) is a Pseudogene.

Additional gene information for SETP10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SETP10 Gene

Genomics for SETP10 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for SETP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J179184 Enhancer 0.6 FANTOM5 Ensembl 600.7 +1.2 1221 0.9 GATAD2A GATAD2B ZNF513 SETP10 TOR3A AXDND1 ENSG00000212338 ABL2
GH01J179190 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.3 7267 1.6 GABPA EED RUNX3 CREM SPI1 ABL2 TOR3A AXDND1 SOAT1 ENSG00000212338 SETP10
GH01J179174 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -5.8 -5833 7.4 CEBPB JUND NFE2 JUN WT1 RFX5 SPI1 RAD21 HNF4A RXRA AXDND1 TOR3A EIF4A1P11 ENSG00000201619 ABL2 FAM20B lnc-TOR3A-2 SETP10
GH01J179193 Enhancer 0.8 Ensembl 0.4 +11.2 11167 3.8 CTCF ZBTB33 PRDM10 ZNF776 REST RAD21 ZNF600 CEBPA SCRT2 KLF9 ENSG00000212338 TOR3A AXDND1 SETP10 ABL2
GH01J179187 Enhancer 0.5 Ensembl 0.7 +4.3 4267 0.8 ZFHX2 ZSCAN16 TCF12 CBFA2T2 CBFA2T3 ZNF121 TOR3A AXDND1 SETP10 ENSG00000212338 ABL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SETP10 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SETP10 Gene

Genomic Locations for SETP10 Gene
chr1:179,183,734-179,184,866
(GRCh38/hg38)
Size:
1,133 bases
Orientation:
Plus strand
chr1:179,152,869-179,153,827
(GRCh37/hg19)
Size:
959 bases
Orientation:
Plus strand

Genomic View for SETP10 Gene

Genes around SETP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SETP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SETP10 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SETP10 Gene

Proteins for SETP10 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SETP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SETP10 Gene

Domains & Families for SETP10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SETP10 Gene

Function for SETP10 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SETP10 Gene

Localization for SETP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SETP10 Gene

Pathways & Interactions for SETP10 Gene

PathCards logo

SuperPathways for SETP10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SETP10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SETP10 Gene

Drugs & Compounds for SETP10 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SETP10 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SETP10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SETP10 Gene

No ASD Table

Relevant External Links for SETP10 Gene

GeneLoc Exon Structure for
SETP10

Expression for SETP10 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SETP10 Gene

mRNA expression in normal human tissues for SETP10 Gene
mRNA expression by GTEx for SETP10 Gene
genes like me logo Genes that share expression patterns with SETP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SETP10 Gene

Orthologs for SETP10 Gene

Evolution for SETP10 Gene

ENSEMBL:
Gene Tree for SETP10 (if available)
TreeFam:
Gene Tree for SETP10 (if available)

No data available for Orthologs for SETP10 Gene

Paralogs for SETP10 Gene

No data available for Paralogs for SETP10 Gene

Variants for SETP10 Gene

Additional Variant Information for SETP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SETP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SETP10 Gene

Disorders for SETP10 Gene

Additional Disease Information for SETP10

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for SETP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SETP10 Gene

Publications for SETP10 Gene

No publications were found for SETP10 Gene.

ExternalLinks

View latest publications for SETP10 gene in Mastermind

Products for SETP10 Gene

Sources for SETP10 Gene