Aliases for SERTAD4-AS1 Gene

Subcategory (RNA class) for SERTAD4-AS1 Gene


Number of RNA Genes sources:

3 / 14

Aliases for SERTAD4-AS1 Gene

  • SERTAD4 Antisense RNA 1 2 3 4 5
  • SERTAD4 Antisense RNA 1 (Non-Protein Coding) 2 3
  • SERTAD4-AS1 2 168
  • C1orf133 3 4
  • Putative Uncharacterized Protein SERTAD4-AS1 4
  • Chromosome 1 Open Reading Frame 133 2
  • SERTAD4 Antisense Gene Protein 1 4
  • HSALNG0010241 167
  • NONHSAG004177 92

External Ids for SERTAD4-AS1 Gene

Additional External Ids for SERTAD4-AS1 Gene

Previous HGNC Symbols for SERTAD4-AS1 Gene

  • C1orf133

Previous GeneCards Identifiers for SERTAD4-AS1 Gene

  • GC01M210405

Summaries for SERTAD4-AS1 Gene

GeneCards Summary for SERTAD4-AS1 Gene

SERTAD4-AS1 (SERTAD4 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SERTAD4-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SERTAD4-AS1 Gene

Genomics for SERTAD4-AS1 Gene

GeneHancer (GH) Regulatory Elements for SERTAD4-AS1 Gene

Promoters and enhancers for SERTAD4-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J210232 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 512 +1.0 966 3.5 EP300 JUND FOS ZNF10 ZIC2 ZBTB10 ZNF423 ZBTB26 KLF7 CHD1 SERTAD4-AS1 SERTAD4 lnc-SERTAD4-1 TRAF3IP3
GH01J210235 Enhancer 0.5 CraniofacialAtlas 514 -1.3 -1299 0.8 ZNF10 OSR2 MYNN WT1 CREB1 TCF7L2 PRDM6 ZNF664 FEZF1 EZH2 SERTAD4-AS1 lnc-SERTAD4-1 SERTAD4 piR-43106-017
GH01J210328 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 15.7 -94.9 -94872 2.3 ZBTB40 SIN3A USF1 POLR2G PHF8 ZFX ZNF10 POLR2A ZBTB26 SKI HHAT RCOR3 SERTAD4-AS1 SERTAD4 RF00017-464
GH01J210371 Promoter/Enhancer 1.4 Ensembl ENCODE 14.9 -139.5 -139505 3.4 EP300 FOXK2 CTCF MYC TCF12 USF1 POLR2G NCOR1 GTF2E2 JUND RF00020-005 RNU5A-8P RCOR3 SERTAD4-AS1 SERTAD4 ST13P19 HHAT ENSG00000287354
GH01J210259 Enhancer 1.2 VISTA Ensembl ENCODE CraniofacialAtlas 17.4 -28.9 -28901 6.4 TEAD4 TEAD1 CTCF ZBTB17 CEBPB POLR2A ZFHX2 ZNF335 EBF1 ZNF189 SERTAD4-AS1 SERTAD4 TRAF3IP3 IRF6 ST13P19 piR-43106-017
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SERTAD4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SERTAD4-AS1 Gene

Genomic Locations for SERTAD4-AS1 Gene
3,854 bases
Minus strand
2,666 bases
Minus strand

Genomic View for SERTAD4-AS1 Gene

Genes around SERTAD4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SERTAD4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SERTAD4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SERTAD4-AS1 Gene

Proteins for SERTAD4-AS1 Gene

  • Protein details for SERTAD4-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein SERTAD4-AS1
    Protein Accession:

    Protein attributes for SERTAD4-AS1 Gene

    156 amino acids
    Molecular mass:
    16212 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SERTAD4-AS1 Gene


neXtProt entry for SERTAD4-AS1 Gene

Post-translational modifications for SERTAD4-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for SERTAD4-AS1 Gene

Domains & Families for SERTAD4-AS1 Gene

Protein Domains for SERTAD4-AS1 Gene

genes like me logo Genes that share domains with SERTAD4-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SERTAD4-AS1 Gene

Function for SERTAD4-AS1 Gene

Phenotypes From GWAS Catalog for SERTAD4-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SERTAD4-AS1 Gene

Localization for SERTAD4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SERTAD4-AS1 Gene

Pathways & Interactions for SERTAD4-AS1 Gene

PathCards logo

SuperPathways for SERTAD4-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SERTAD4-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SERTAD4-AS1 Gene

Drugs & Compounds for SERTAD4-AS1 Gene

No Compound Related Data Available

Transcripts for SERTAD4-AS1 Gene

mRNA/cDNA for SERTAD4-AS1 Gene

14 RNACentral transcripts :
3 NCBI additional mRNA sequence :
6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
8 LncBook transcripts :
13 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SERTAD4-AS1 Gene

No ASD Table

Relevant External Links for SERTAD4-AS1 Gene

GeneLoc Exon Structure for

Expression for SERTAD4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SERTAD4-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SERTAD4-AS1 Gene

This gene is overexpressed in Colon - Sigmoid (x5.1).

Protein differential expression in normal tissues from HIPED for SERTAD4-AS1 Gene

This gene is overexpressed in Retina (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SERTAD4-AS1 Gene

Protein tissue co-expression partners for SERTAD4-AS1 Gene

- Elite partner

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SERTAD4-AS1

SOURCE GeneReport for Unigene cluster for SERTAD4-AS1 Gene:

genes like me logo Genes that share expression patterns with SERTAD4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SERTAD4-AS1 Gene

Orthologs for SERTAD4-AS1 Gene

Evolution for SERTAD4-AS1 Gene

Gene Tree for SERTAD4-AS1 (if available)
Gene Tree for SERTAD4-AS1 (if available)

No data available for Orthologs for SERTAD4-AS1 Gene

Paralogs for SERTAD4-AS1 Gene

No data available for Paralogs for SERTAD4-AS1 Gene

Variants for SERTAD4-AS1 Gene

Additional dbSNP identifiers (rs#s) for SERTAD4-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for SERTAD4-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1068469 CNV deletion 25765185
nsv1121788 CNV deletion 24896259
nsv8769 CNV gain 18304495

Additional Variant Information for SERTAD4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SERTAD4-AS1 Gene

Disorders for SERTAD4-AS1 Gene

Additional Disease Information for SERTAD4-AS1

No disorders were found for SERTAD4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SERTAD4-AS1 Gene

Publications for SERTAD4-AS1 Gene

  1. TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions. (PMID: 27609421) Banks CA … Washburn MP (Molecular & cellular proteomics : MCP 2016) 3 54
  2. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G … Wijmenga C (Gut 2009) 3 54
  3. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 54
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 54
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for SERTAD4-AS1 Gene

Sources for SERTAD4-AS1 Gene