Aliases for SEPTIN7-DT Gene

Subcategory (RNA class) for SEPTIN7-DT Gene

lncRNA

Aliases for SEPTIN7-DT Gene

  • SEPTIN7 Divergent Transcript 2 3
  • SEPT7 Antisense RNA 1 (Head To Head) 2 3
  • SEPTIN7-AS1 3
  • SEPT7-AS1 3

External Ids for SEPTIN7-DT Gene

Previous HGNC Symbols for SEPTIN7-DT Gene

  • SEPT7-AS1
  • SEPTIN7-AS1

Summaries for SEPTIN7-DT Gene

GeneCards Summary for SEPTIN7-DT Gene

SEPTIN7-DT (SEPTIN7 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SEPTIN7-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SEPTIN7-DT Gene

Genomics for SEPTIN7-DT Gene

GeneHancer (GH) Regulatory Elements for SEPTIN7-DT Gene

Promoters and enhancers for SEPTIN7-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SEPTIN7-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for SEPTIN7-DT Gene

Genomic Locations for SEPTIN7-DT Gene
chr7:35,754,964-35,800,625
(GRCh38/hg38)
Size:
45,662 bases
Orientation:
Minus strand

Genomic View for SEPTIN7-DT Gene

Genes around SEPTIN7-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEPTIN7-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEPTIN7-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEPTIN7-DT Gene

Proteins for SEPTIN7-DT Gene

Post-translational modifications for SEPTIN7-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEPTIN7-DT Gene

Domains & Families for SEPTIN7-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SEPTIN7-DT Gene

Function for SEPTIN7-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEPTIN7-DT Gene

Localization for SEPTIN7-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SEPTIN7-DT Gene

Pathways & Interactions for SEPTIN7-DT Gene

PathCards logo

SuperPathways for SEPTIN7-DT Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SEPTIN7-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SEPTIN7-DT Gene

Drugs & Compounds for SEPTIN7-DT Gene

No Compound Related Data Available

Transcripts for SEPTIN7-DT Gene

mRNA/cDNA for SEPTIN7-DT Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for SEPTIN7-DT Gene

No ASD Table

Relevant External Links for SEPTIN7-DT Gene

GeneLoc Exon Structure for
SEPTIN7-DT

Expression for SEPTIN7-DT Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SEPTIN7-DT

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SEPTIN7-DT Gene

Orthologs for SEPTIN7-DT Gene

No data available for Orthologs and Evolution for SEPTIN7-DT Gene

Paralogs for SEPTIN7-DT Gene

No data available for Paralogs for SEPTIN7-DT Gene

Variants for SEPTIN7-DT Gene

Additional dbSNP identifiers (rs#s) for SEPTIN7-DT Gene

Structural Variations from Database of Genomic Variants (DGV) for SEPTIN7-DT Gene

Variant ID Type Subtype PubMed ID
esv2759522 CNV gain 17122850
esv3612820 CNV loss 21293372
nsv1026491 CNV gain 25217958
nsv475121 CNV novel sequence insertion 20440878
nsv477031 CNV novel sequence insertion 20440878
nsv970462 CNV duplication 23825009

Additional Variant Information for SEPTIN7-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SEPTIN7-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SEPTIN7-DT Gene

Disorders for SEPTIN7-DT Gene

No disorders were found for SEPTIN7-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SEPTIN7-DT Gene

Publications for SEPTIN7-DT Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

Products for SEPTIN7-DT Gene

Sources for SEPTIN7-DT Gene