Aliases for SEC22B2P Gene

Aliases for SEC22B2P Gene

  • SEC22 Homolog B2, Pseudogene 2 3
  • SEC22 Homolog B2 2 3
  • Vesicle-Trafficking Protein SEC22b 3
  • CH17-189H20.1 3
  • SEC22B2 3

External Ids for SEC22B2P Gene

Previous HGNC Symbols for SEC22B2P Gene

  • SEC22B2

Summaries for SEC22B2P Gene

GeneCards Summary for SEC22B2P Gene

SEC22B2P (SEC22 Homolog B2, Pseudogene) is a Pseudogene.

Additional gene information for SEC22B2P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SEC22B2P Gene

Genomics for SEC22B2P Gene

GeneHancer (GH) Regulatory Elements for SEC22B2P Gene

Promoters and enhancers for SEC22B2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J149343 Enhancer 0.2 Ensembl 0.4 +5.1 5063 0.2 ENSG00000274423 SEC22B2P
GH01J149329 Enhancer 0.2 Ensembl 0.4 -8.5 -8537 0.6 ENSG00000215861 SEC22B2P
GH01J149350 Enhancer 0.2 Ensembl 0.4 +18.5 18462 11.8 HSALNG0006534-003 HSALNG0006673-003 ENSG00000274423 SEC22B2P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SEC22B2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SEC22B2P Gene

Genomic Locations for SEC22B2P Gene
chr1:149,338,438-149,362,499
(GRCh38/hg38)
Size:
24,062 bases
Orientation:
Plus strand

Genomic View for SEC22B2P Gene

Genes around SEC22B2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SEC22B2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SEC22B2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SEC22B2P Gene

Proteins for SEC22B2P Gene

Post-translational modifications for SEC22B2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SEC22B2P Gene

Domains & Families for SEC22B2P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SEC22B2P Gene

Function for SEC22B2P Gene

Phenotypes From GWAS Catalog for SEC22B2P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SEC22B2P Gene

Localization for SEC22B2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SEC22B2P Gene

Pathways & Interactions for SEC22B2P Gene

PathCards logo

SuperPathways for SEC22B2P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SEC22B2P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SEC22B2P Gene

Drugs & Compounds for SEC22B2P Gene

No Compound Related Data Available

Transcripts for SEC22B2P Gene

mRNA/cDNA for SEC22B2P Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for SEC22B2P Gene

No ASD Table

Relevant External Links for SEC22B2P Gene

GeneLoc Exon Structure for
SEC22B2P

Expression for SEC22B2P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SEC22B2P Gene

Orthologs for SEC22B2P Gene

No data available for Orthologs and Evolution for SEC22B2P Gene

Paralogs for SEC22B2P Gene

No data available for Paralogs for SEC22B2P Gene

Variants for SEC22B2P Gene

Additional Variant Information for SEC22B2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SEC22B2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SEC22B2P Gene

Disorders for SEC22B2P Gene

No disorders were found for SEC22B2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SEC22B2P Gene

Publications for SEC22B2P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for SEC22B2P Gene

Sources for SEC22B2P Gene