Aliases for SDHDP2 Gene

Aliases for SDHDP2 Gene

  • Succinate Dehydrogenase Complex Subunit D Pseudogene 2 2 3 5
  • Succinate Dehydrogenase Complex, Subunit D, Integral Membrane Protein Pseudogene 2 2 3
  • Succinate Dehydrogenase Complex Subunit D, Integral Membrane Protein Pseudogene 2 2
  • Succinate Dehydrogenase Complex, Subunit D Pseudogene 3

External Ids for SDHDP2 Gene

Previous GeneCards Identifiers for SDHDP2 Gene

  • GC07U990266
  • GC07P135131

Summaries for SDHDP2 Gene

GeneCards Summary for SDHDP2 Gene

SDHDP2 (Succinate Dehydrogenase Complex Subunit D Pseudogene 2) is a Pseudogene.

Additional gene information for SDHDP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SDHDP2 Gene

Genomics for SDHDP2 Gene

GeneHancer (GH) Regulatory Elements for SDHDP2 Gene

Promoters and enhancers for SDHDP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J135444 Enhancer 0.7 Ensembl 0.7 +2.5 2461 4.2 ZNF316 TRIM24 CEBPG CEBPB PBX2 ZC3H8 ZNF318 EP400 FOXK2 NCOA1 RPL15P11 ENSG00000273219 SDHDP2 lnc-NUP205-3 piR-42694-155 lnc-SLC13A4-2 CNOT4
GH07J135440 Enhancer 0.6 Ensembl 0.7 -2.5 -2539 3 REST OSR2 MIER1 FOS FOSL2 SPI1 FOSL1 EHMT2 CEBPG MIER2 STMP1 SDHDP2 lnc-WDR91-3 CNOT4 RF00017-6655 lnc-SLC13A4-2
GH07J135427 Enhancer 0.6 Ensembl 0.4 -14.8 -14839 3.6 MYC ZNF316 MAFF GATA3 SPI1 EHMT2 MAFK MAFG ATF4 ATF2 STMP1 ENSG00000273219 SDHDP2 lnc-WDR91-3 RF00017-6655 CNOT4 lnc-SLC13A4-2
GH07J135424 Enhancer 0.5 Ensembl 0.4 -20.1 -20139 0.6 ZNF316 MAFF FOXA1 MAFG ZNF664 ZBTB33 MAFK EMSY SDHDP2 lnc-WDR91-3 RF00017-6655 CNOT4 lnc-SLC13A4-2
GH07J135391 Enhancer 0.3 Ensembl 0.2 -53.5 -53539 0.6 PRDM1 lnc-WDR91-3 RF00017-6655 SDHDP2 CNOT4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SDHDP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDHDP2 Gene

Genomic Locations for SDHDP2 Gene
chr7:135,444,440-135,445,740
(GRCh38/hg38)
Size:
1,301 bases
Orientation:
Plus strand
chr7:135,129,188-135,130,488
(GRCh37/hg19)
Size:
1,301 bases
Orientation:
Plus strand

Genomic View for SDHDP2 Gene

Genes around SDHDP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDHDP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDHDP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDHDP2 Gene

Proteins for SDHDP2 Gene

Post-translational modifications for SDHDP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDHDP2 Gene

Domains & Families for SDHDP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SDHDP2 Gene

Function for SDHDP2 Gene

Molecular function for SDHDP2 Gene

GENATLAS Biochemistry:
succinate dehydrogenase complex, subunit D, integral membrane protein pseudogene 2

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDHDP2 Gene

Localization for SDHDP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDHDP2 Gene

Pathways & Interactions for SDHDP2 Gene

PathCards logo

SuperPathways for SDHDP2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SDHDP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SDHDP2 Gene

Drugs & Compounds for SDHDP2 Gene

No Compound Related Data Available

Transcripts for SDHDP2 Gene

mRNA/cDNA for SDHDP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SDHDP2 Gene

No ASD Table

Relevant External Links for SDHDP2 Gene

GeneLoc Exon Structure for
SDHDP2

Expression for SDHDP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SDHDP2 Gene

genes like me logo Genes that share expression patterns with SDHDP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDHDP2 Gene

Orthologs for SDHDP2 Gene

Evolution for SDHDP2 Gene

ENSEMBL:
Gene Tree for SDHDP2 (if available)
TreeFam:
Gene Tree for SDHDP2 (if available)

No data available for Orthologs for SDHDP2 Gene

Paralogs for SDHDP2 Gene

No data available for Paralogs for SDHDP2 Gene

Variants for SDHDP2 Gene

Additional Variant Information for SDHDP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDHDP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDHDP2 Gene

Disorders for SDHDP2 Gene

No disorders were found for SDHDP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDHDP2 Gene

Publications for SDHDP2 Gene

  1. Characterization of the human SDHD gene encoding the small subunit of cytochrome b (cybS) in mitochondrial succinate-ubiquinone oxidoreductase. (PMID: 10482792) Hirawake H … Kita K (Biochimica et biophysica acta 1999) 2 3 54

Products for SDHDP2 Gene

Sources for SDHDP2 Gene