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Aliases for SDCBPP2 Gene

Aliases for SDCBPP2 Gene

  • Syndecan Binding Protein Pseudogene 2 2 3 5
  • Syndecan Binding Protein (Syntenin) Pseudogene 2 2

External Ids for SDCBPP2 Gene

Previous GeneCards Identifiers for SDCBPP2 Gene

  • GC08P070855

Summaries for SDCBPP2 Gene

GeneCards Summary for SDCBPP2 Gene

SDCBPP2 (Syndecan Binding Protein Pseudogene 2) is a Pseudogene.

Additional gene information for SDCBPP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDCBPP2 Gene

Genomics for SDCBPP2 Gene

GeneHancer (GH) Regulatory Elements for SDCBPP2 Gene

Promoters and enhancers for SDCBPP2 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I069942 Promoter/Enhancer 1.2 Ensembl ENCODE 550.8 -0.2 -221 0.6 CTCF SIN3A RAD21 ZNF335 CC2D1A E2F1 SMC3 ZNF143 ZNF600 ZSCAN29 SDCBPP2 ENSG00000280393
GH08I069944 Enhancer 0.2 ENCODE 550.8 +1.9 1938 0.6 SDCBPP2 RNU1-101P RN7SKP29 GC08M069988
GH08I069946 Enhancer 0.7 ENCODE 0.8 +3.4 3420 0.2 CTCF MAX SIN3A ZNF384 RAD21 RARA ZNF316 ZNF143 SMC3 NR2F6 RNU1-101P RN7SKP29 SDCBPP2 GC08M069988
GH08I069978 Enhancer 0.7 ENCODE dbSUPER 0.3 +36.7 36663 1.4 IKZF1 POU5F1 JUNB RUNX3 LOC101929759 SLCO5A1 GC08M069988 SDCBPP2
GH08I069977 Enhancer 0.6 ENCODE dbSUPER 0.3 +34.6 34590 0.2 SP1 POLR2A POU5F1 RNU1-101P GC08M069988 SDCBPP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SDCBPP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDCBPP2 Gene

Genomic Locations for SDCBPP2 Gene
1,728 bases
Plus strand

Genomic View for SDCBPP2 Gene

Genes around SDCBPP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDCBPP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDCBPP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDCBPP2 Gene

Proteins for SDCBPP2 Gene

Post-translational modifications for SDCBPP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDCBPP2 Gene

Domains & Families for SDCBPP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDCBPP2 Gene

Function for SDCBPP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCBPP2 Gene

Localization for SDCBPP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDCBPP2 Gene

Pathways & Interactions for SDCBPP2 Gene

SuperPathways for SDCBPP2 Gene

No Data Available

Interacting Proteins for SDCBPP2 Gene

Gene Ontology (GO) - Biological Process for SDCBPP2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SDCBPP2 Gene

Drugs & Compounds for SDCBPP2 Gene

No Compound Related Data Available

Transcripts for SDCBPP2 Gene

mRNA/cDNA for SDCBPP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SDCBPP2 Gene

No ASD Table

Relevant External Links for SDCBPP2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SDCBPP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDCBPP2 Gene

mRNA differential expression in normal tissues according to GTEx for SDCBPP2 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x6.0), Brain - Caudate (basal ganglia) (x4.8), Brain - Putamen (basal ganglia) (x4.7), Brain - Anterior cingulate cortex (BA24) (x4.5), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Cortex (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of SDCBPP2 Gene:

genes like me logo Genes that share expression patterns with SDCBPP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDCBPP2 Gene

Orthologs for SDCBPP2 Gene

Evolution for SDCBPP2 Gene

Gene Tree for SDCBPP2 (if available)
Gene Tree for SDCBPP2 (if available)

No data available for Orthologs for SDCBPP2 Gene

Paralogs for SDCBPP2 Gene

No data available for Paralogs for SDCBPP2 Gene

Variants for SDCBPP2 Gene

Additional Variant Information for SDCBPP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCBPP2 Gene

Disorders for SDCBPP2 Gene

Additional Disease Information for SDCBPP2

No disorders were found for SDCBPP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SDCBPP2 Gene

Publications for SDCBPP2 Gene

No publications were found for SDCBPP2 Gene.

Products for SDCBPP2 Gene

Sources for SDCBPP2 Gene

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