Aliases for SDCBPP1 Gene

Aliases for SDCBPP1 Gene

  • Syndecan Binding Protein Pseudogene 1 2 3 5
  • Syndecan Binding Protein (Syntenin) Pseudogene 1 2 3
  • SDCBPP1 5

External Ids for SDCBPP1 Gene

Previous GeneCards Identifiers for SDCBPP1 Gene

  • GC10M006336

Summaries for SDCBPP1 Gene

GeneCards Summary for SDCBPP1 Gene

SDCBPP1 (Syndecan Binding Protein Pseudogene 1) is a Pseudogene.

Additional gene information for SDCBPP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SDCBPP1 Gene

Genomics for SDCBPP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SDCBPP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J006295 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.7 -4.2 -4162 7 BCLAF1 SP1 ZNF207 POLR2A JUND ZIC2 BCL11A ZNF592 TRIM22 BHLHE40 HSALNG0075942 PFKFB3 FBH1 ENSG00000226647 TASOR2 ENSG00000213994 PRKCQ IL15RA RBM17 SDCBPP1
GH10J006290 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.5 2539 3.2 ZNF10 SMAD5 BHLHE40 FEZF1 RXRA ZNF843 PRDM6 HNF4A PRDM4 SREBF1 PRKCQ PFKFB3 MN309174-034 SDCBPP1 lnc-PRKCQ-4 HSALNG0075942 LINC02649
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SDCBPP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SDCBPP1 Gene

Latest Assembly
1,835 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
1,835 bases
Minus strand

(GRCh37/hg19 by Ensembl)
1,585 bases
Minus strand

Genomic View for SDCBPP1 Gene

Genes around SDCBPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDCBPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDCBPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDCBPP1 Gene

Proteins for SDCBPP1 Gene

Post-translational modifications for SDCBPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDCBPP1 Gene

Domains & Families for SDCBPP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SDCBPP1 Gene

Function for SDCBPP1 Gene

Phenotypes From GWAS Catalog for SDCBPP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDCBPP1 Gene

Localization for SDCBPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDCBPP1 Gene

Pathways & Interactions for SDCBPP1 Gene

PathCards logo

SuperPathways for SDCBPP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SDCBPP1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SDCBPP1 Gene

Drugs & Compounds for SDCBPP1 Gene

No Compound Related Data Available

Transcripts for SDCBPP1 Gene

mRNA/cDNA for SDCBPP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SDCBPP1 Gene

No ASD Table

Relevant External Links for SDCBPP1 Gene

GeneLoc Exon Structure for

Expression for SDCBPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SDCBPP1 Gene

genes like me logo Genes that share expression patterns with SDCBPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDCBPP1 Gene

Orthologs for SDCBPP1 Gene

Evolution for SDCBPP1 Gene

Gene Tree for SDCBPP1 (if available)
Gene Tree for SDCBPP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for SDCBPP1

No data available for Orthologs for SDCBPP1 Gene

Paralogs for SDCBPP1 Gene

No data available for Paralogs for SDCBPP1 Gene

Variants for SDCBPP1 Gene

Additional Variant Information for SDCBPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDCBPP1 Gene

Disorders for SDCBPP1 Gene

No disorders were found for SDCBPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SDCBPP1 Gene

Publications for SDCBPP1 Gene

No publications were found for SDCBPP1 Gene.

No data available for Mastermind for SDCBPP1 Gene

Products for SDCBPP1 Gene

Sources for SDCBPP1 Gene