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Aliases for SDAD1P1 Gene

Aliases for SDAD1P1 Gene

  • SDA1 Domain Containing 1 Pseudogene 1 2 3 5

External Ids for SDAD1P1 Gene

Previous GeneCards Identifiers for SDAD1P1 Gene

  • GC08U900490
  • GC08M026057
  • GC08M026236

Summaries for SDAD1P1 Gene

GeneCards Summary for SDAD1P1 Gene

SDAD1P1 (SDA1 Domain Containing 1 Pseudogene 1) is a Pseudogene.

Additional gene information for SDAD1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SDAD1P1 Gene

Genomics for SDAD1P1 Gene

GeneHancer (GH) Regulatory Elements for SDAD1P1 Gene

Promoters and enhancers for SDAD1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J026382 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 629.1 -1.2 -1187 4.1 ZNF652 ZFX SP1 ELF3 MNT CBFA2T2 ZNF148 NKRF MLLT1 ZNF121 SDAD1P1 BNIP3L ENSG00000253430
GH08J026374 Enhancer 1.3 FANTOM5 Ensembl ENCODE 31.9 +8.9 8852 1.4 CC2D1A ZNF121 ZSCAN21 CTCF SP7 MZF1 RAD21 CREB1 IKZF1 ZNF600 SDAD1P1 PPP2R2A GC08M026286
GH08J026447 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 15.9 -67.5 -67531 5.4 ZFX ZNF148 NKRF MLLT1 ZNF121 ZSCAN21 NCOA3 ZBTB7A TRIM24 SP7 SDAD1P1 PNMA2 DPYSL2 BNIP3L LOC105379337 ENSG00000254362
GH08J026290 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.3 +89.0 88961 6.9 ELF3 ZFX CBFA2T2 ZNF148 POLR2A MLLT1 ZNF121 CEBPG RERE GTF2F1 PPP2R2A SDAD1P1 GC08M026286
GH08J026329 Enhancer 1.1 ENCODE dbSUPER 26.9 +52.3 52269 3.1 ELF3 CEBPG ZSCAN21 MAFK SP7 SP5 PRDM1 ZNF644 KAT8 FOSL2 SDAD1P1 PPP2R2A BNIP3L DPYSL2 PNMA2 GC08M026286
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SDAD1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SDAD1P1 Gene

Genomic Locations for SDAD1P1 Gene
chr8:26,375,913-26,382,953
(GRCh38/hg38)
Size:
7,041 bases
Orientation:
Minus strand
chr8:26,236,646-26,240,469
(GRCh37/hg19)
Size:
3,824 bases
Orientation:
Minus strand

Genomic View for SDAD1P1 Gene

Genes around SDAD1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SDAD1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SDAD1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SDAD1P1 Gene

Proteins for SDAD1P1 Gene

Post-translational modifications for SDAD1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SDAD1P1 Gene

Domains & Families for SDAD1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SDAD1P1 Gene

Function for SDAD1P1 Gene

Phenotypes From GWAS Catalog for SDAD1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SDAD1P1 Gene

Localization for SDAD1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SDAD1P1 Gene

Pathways & Interactions for SDAD1P1 Gene

PathCards logo

SuperPathways for SDAD1P1 Gene

No Data Available

Interacting Proteins for SDAD1P1 Gene

Gene Ontology (GO) - Biological Process for SDAD1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SDAD1P1 Gene

Drugs & Compounds for SDAD1P1 Gene

No Compound Related Data Available

Transcripts for SDAD1P1 Gene

mRNA/cDNA for SDAD1P1 Gene

(4) Additional mRNA sequences :
(17) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SDAD1P1 Gene

No ASD Table

Relevant External Links for SDAD1P1 Gene

GeneLoc Exon Structure for
SDAD1P1
ECgene alternative splicing isoforms for
SDAD1P1

Expression for SDAD1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SDAD1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SDAD1P1 Gene:

SDAD1P1
genes like me logo Genes that share expression patterns with SDAD1P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SDAD1P1 Gene

Orthologs for SDAD1P1 Gene

Evolution for SDAD1P1 Gene

ENSEMBL:
Gene Tree for SDAD1P1 (if available)
TreeFam:
Gene Tree for SDAD1P1 (if available)

No data available for Orthologs for SDAD1P1 Gene

Paralogs for SDAD1P1 Gene

No data available for Paralogs for SDAD1P1 Gene

Variants for SDAD1P1 Gene

Sequence variations from dbSNP and Humsavar for SDAD1P1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000074983 -- 26,383,626(-) G/A/T upstream_transcript_variant
rs1000368597 -- 26,381,651(-) T/C non_coding_transcript_variant
rs1001457874 -- 26,383,371(-) C/T upstream_transcript_variant
rs1001760529 -- 26,383,095(-) T/G upstream_transcript_variant
rs1001919948 -- 26,380,333(-) T/C non_coding_transcript_variant

Additional Variant Information for SDAD1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SDAD1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SDAD1P1 Gene

Disorders for SDAD1P1 Gene

Additional Disease Information for SDAD1P1

No disorders were found for SDAD1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SDAD1P1 Gene

Publications for SDAD1P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SDAD1P1 Gene

Sources for SDAD1P1 Gene

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