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Aliases for SCML2P2 Gene

Subcategory (RNA class) for SCML2P2 Gene

lncRNA

Aliases for SCML2P2 Gene

  • SCML2 Pseudogene 2 2 3

External Ids for SCML2P2 Gene

Previous GeneCards Identifiers for SCML2P2 Gene

  • GC16U901388
  • GC16P025386
  • GC16P025473

Summaries for SCML2P2 Gene

GeneCards Summary for SCML2P2 Gene

SCML2P2 (SCML2 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SCML2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SCML2P2 Gene

Genomics for SCML2P2 Gene

GeneHancer (GH) Regulatory Elements for SCML2P2 Gene

Promoters and enhancers for SCML2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I025256 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 48.7 +188.3 188253 2.8 MLX ZFP64 FEZF1 DMAP1 IRF4 ZNF213 ZNF416 ZNF143 ZNF548 SP3 ZKSCAN2 ENSG00000274925 GC16P025953 RBBP6 LOC554206 ENSG00000261669 SCML2P2 HMGN2P3 ENSG00000263326 ARHGAP17
GH16I025047 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 36.2 -19.3 -19253 5.3 HDGF PKNOX1 SMAD1 ARNT ZFP64 SIN3A FEZF1 ZNF2 POLR2B ZNF213 RBBP6 LOC100421173 ENSG00000263326 ZKSCAN2 SCML2P2 LOC554206 ENSG00000261669 HMGN2P3 LINC02175 LCMT1
GH16I024998 Enhancer 1.3 Ensembl ENCODE dbSUPER 13.4 -69.7 -69687 2.2 FOXA2 MLX ARID4B ZNF213 NFYC ZHX2 MXD4 MIER2 ZNF623 PPARG PIR57337 GC16M024999 LINC02175 ENSG00000263326 SCML2P2 RBBP6 ZKSCAN2 LOC100421173 LOC554206 ENSG00000261669
GH16I024728 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.7 -338.9 -338895 4 PKNOX1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF207 TNRC6A SLC5A11 RBBP6 SCML2P2 GC16M024776 LINC01567
GH16I025037 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 8.2 -31.3 -31334 2.1 PKNOX1 FOXA2 SMAD1 BMI1 IRF4 ETS1 ATF7 ETV6 FOS IKZF2 SCML2P2 LOC554206 LINC02175
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SCML2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SCML2P2 Gene

Genomic Locations for SCML2P2 Gene
chr16:25,069,570-25,070,301
(GRCh38/hg38)
Size:
732 bases
Orientation:
Plus strand
chr16:25,080,891-25,081,622
(GRCh37/hg19)

Genomic View for SCML2P2 Gene

Genes around SCML2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SCML2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SCML2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SCML2P2 Gene

ORGUL Member Location for SCML2P2 Gene

ORGUL Member Location for SCML2P2 gene

Proteins for SCML2P2 Gene

Post-translational modifications for SCML2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SCML2P2 Gene

Domains & Families for SCML2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SCML2P2 Gene

Function for SCML2P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SCML2P2 Gene

Localization for SCML2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SCML2P2 Gene

Pathways & Interactions for SCML2P2 Gene

SuperPathways for SCML2P2 Gene

No Data Available

Interacting Proteins for SCML2P2 Gene

Gene Ontology (GO) - Biological Process for SCML2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SCML2P2 Gene

Drugs & Compounds for SCML2P2 Gene

No Compound Related Data Available

Transcripts for SCML2P2 Gene

mRNA/cDNA for SCML2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SCML2P2 Gene

No ASD Table

Relevant External Links for SCML2P2 Gene

GeneLoc Exon Structure for
SCML2P2
ECgene alternative splicing isoforms for
SCML2P2

Expression for SCML2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SCML2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SCML2P2 Gene:

SCML2P2
genes like me logo Genes that share expression patterns with SCML2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SCML2P2 Gene

Orthologs for SCML2P2 Gene

Evolution for SCML2P2 Gene

ENSEMBL:
Gene Tree for SCML2P2 (if available)
TreeFam:
Gene Tree for SCML2P2 (if available)

No data available for Orthologs for SCML2P2 Gene

Paralogs for SCML2P2 Gene

No data available for Paralogs for SCML2P2 Gene

Variants for SCML2P2 Gene

Additional Variant Information for SCML2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SCML2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SCML2P2 Gene

Disorders for SCML2P2 Gene

No disorders were found for SCML2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SCML2P2 Gene

Publications for SCML2P2 Gene

No publications were found for SCML2P2 Gene.

Products for SCML2P2 Gene

Sources for SCML2P2 Gene

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