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Aliases for SBNO1 Gene
Aliases for SBNO1 Gene
External Ids for SBNO1 Gene
- HGNC: 22973
- Entrez Gene: 55206
- Ensembl: ENSG00000139697
- OMIM: 614274
- UniProtKB: A3KN83
Previous GeneCards Identifiers for SBNO1 Gene
- GC12M123587
- GC12M122216
- GC12M122217
- GC12M122305
- GC12M123780
- GC12M120734
- GC12M123774
Summaries for SBNO1 Gene
GeneCards Summary for SBNO1 Gene
SBNO1 (Strawberry Notch Homolog 1) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include oxidoreductase activity and hydrolase activity. An important paralog of this gene is SBNO2.
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SBNO1 Gene
Genomics for SBNO1 Gene
GeneHancer (GH) Regulatory Elements for SBNO1 Gene
Promoters and enhancers for SBNO1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SBNO1 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the SBNO1 gene promoter:
-
- AREB6
- Egr-2
- Oct-B1
- oct-B2
- oct-B3
- POU2F1
- Sp1
- SRY
- USF-1
- USF1
Genomic Locations for SBNO1 Gene
Genomic Locations for SBNO1 Gene
- chr12:123,289,109-123,365,525
- (GRCh38/hg38)
- Size:
- 76,417 bases
- Orientation:
- Minus strand
- chr12:123,773,656-123,849,390
- (GRCh37/hg19)
- Size:
- 75,735 bases
- Orientation:
- Minus strand
Genomic View for SBNO1 Gene
Genes around SBNO1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12q24.31 by HGNC
- 12q24.31 by Entrez Gene
- 12q24.31 by Ensembl
SBNO1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SBNO1 Gene
Proteins for SBNO1 Gene
-
Protein details for SBNO1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A3KN83-SBNO1_HUMAN
- Recommended name:
- Protein strawberry notch homolog 1
- Protein Accession:
- A3KN83
- Q05C06
- Q3ZTS3
- Q9H3T8
- Q9NVB2
Protein attributes for SBNO1 Gene
- Size:
- 1393 amino acids
- Molecular mass:
- 154312 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=AAQ76814.1; Type=Erroneous initiation; Evidence={ECO:0000305};
Protein Expression for SBNO1 Gene
Post-translational modifications for SBNO1 Gene
Other Protein References for SBNO1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Atlas Antibodies Anti-SBNO1 Antibody
- Creative Diagnostics Anti-SBNO1 (aa 13-130) polyclonal antibody and Anti-SBNO1 monoclonal antibody
- Novus Biologicals Antibodies for SBNO1
-
Abcam antibodies for SBNO1
- Invitrogen Antibodies for SBNO1 (AFLGC-SBNO1)
- antibodies-online: Show 14 available SBNO1 Antibodies ranked by validation data
-
Biorbyt antibodies for SBNO1
-
Santa Cruz Biotechnology (SCBT) Antibodies for SBNO1
Protein Products
-
OriGene Purified Proteins for SBNO1
- Search Origene for MassSpec and Protein Over-expression Lysates for SBNO1
- Origene Custom Protein Services for SBNO1
-
Abcam proteins for SBNO1
No data available for DME Specific Peptides for SBNO1 Gene
Domains & Families for SBNO1 Gene
Gene Families for SBNO1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for SBNO1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for SBNO1 Gene
- GenScript: Design optimal peptide antigens:
-
- Monocyte protein 3 (SBNO1_HUMAN)
Graphical View of Domain Structure for InterPro Entry
A3KN83- Family:
-
- Belongs to the SBNO family.
Function for SBNO1 Gene
Phenotypes From GWAS Catalog for SBNO1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003674 | molecular_function | ND | -- |
Phenotypes for SBNO1 Gene
- MGI mutant phenotypes for SBNO1:
- inferred from 2 alleles
- GenomeRNAi human phenotypes for SBNO1:
-
- Increased shRNA abundance (Z-score > 2)
- Decreased shRNA abundance (Z-score < -2)
- Decreased ionizing radiation sensitivity
- Decreased viability
- no effect
- Increased vaccinia virus (VACV) infection
- Resistant to vaccinia virus (VACV-A4L) infection
- Decreased hepcidin::fluc mRNA expression
- Decreased NF-kappaB reporter expression
- Lamellipodia cells
Animal Models for SBNO1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
-
OriGene CRISPR knockouts for SBNO1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SBNO1
- genomics-online: gRNA clones - Search results for available SBNO1 gene related products
- Applied Biological Materials (abm): CRISPR Clones for SBNO1 - Select products 50% OFF >
- * SBNO1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * SBNO1 CRISPR applications: KO, Activation, Repression, and more - Browse All
-
Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
miRNA for SBNO1 Gene
- miRTarBase miRNAs that target SBNO1
-
- hsa-mir-188-5p (MIRT044901)
- hsa-mir-218-5p (MIRT046997)
- hsa-mir-196a-5p (MIRT048283)
- hsa-mir-450b-5p (MIRT184667)
- hsa-mir-153-5p (MIRT184693)
- hsa-mir-4659a-5p (MIRT270702)
- hsa-mir-4659b-5p (MIRT270703)
- hsa-mir-5590-5p (MIRT270705)
- hsa-mir-4776-3p (MIRT510814)
- hsa-mir-6848-3p (MIRT510815)
- hsa-mir-6843-3p (MIRT510816)
- hsa-mir-4776-5p (MIRT510817)
- hsa-mir-19b-2-5p (MIRT510818)
- hsa-mir-19b-1-5p (MIRT510819)
- hsa-mir-19a-5p (MIRT510820)
- hsa-mir-4800-5p (MIRT510821)
- hsa-mir-3138 (MIRT510822)
- hsa-mir-3619-3p (MIRT510823)
- hsa-mir-3663-5p (MIRT510824)
- hsa-mir-6131 (MIRT510825)
- hsa-mir-4657 (MIRT510826)
- hsa-mir-4491 (MIRT510827)
- hsa-mir-1911-3p (MIRT510828)
- hsa-mir-374b-3p (MIRT521188)
- hsa-mir-4524b-5p (MIRT521189)
- hsa-mir-4524a-5p (MIRT521190)
- hsa-mir-922 (MIRT521191)
- hsa-mir-646 (MIRT521192)
- hsa-mir-503-5p (MIRT521193)
- hsa-mir-32-3p (MIRT521194)
- hsa-mir-548av-3p (MIRT521195)
- hsa-mir-548f-3p (MIRT521196)
- hsa-mir-548e-3p (MIRT521197)
- hsa-mir-548az-3p (MIRT521198)
- hsa-mir-548ar-3p (MIRT521199)
- hsa-mir-548a-3p (MIRT521200)
- hsa-mir-15b-5p (MIRT521201)
- hsa-mir-497-5p (MIRT521202)
- hsa-mir-424-5p (MIRT521203)
- hsa-mir-195-5p (MIRT521204)
- hsa-mir-6838-5p (MIRT521205)
- hsa-mir-16-5p (MIRT521206)
- hsa-mir-15a-5p (MIRT521207)
- hsa-mir-8073 (MIRT521208)
- hsa-mir-221-5p (MIRT521209)
- hsa-mir-5089-5p (MIRT521210)
- hsa-mir-6807-5p (MIRT521211)
- hsa-mir-5589-5p (MIRT521212)
- hsa-mir-4731-5p (MIRT521213)
- hsa-mir-6506-5p (MIRT521214)
- hsa-mir-619-5p (MIRT521215)
- hsa-mir-4433b-3p (MIRT521216)
- hsa-mir-302b-3p (MIRT521217)
- hsa-mir-302c-3p (MIRT521218)
- hsa-mir-520d-3p (MIRT521219)
- hsa-mir-302d-3p (MIRT521220)
- hsa-mir-302e (MIRT521221)
- hsa-mir-520b (MIRT521222)
- hsa-mir-372-3p (MIRT521223)
- hsa-mir-520e (MIRT521224)
- hsa-mir-520c-3p (MIRT521225)
- hsa-mir-373-3p (MIRT521226)
- hsa-mir-520a-3p (MIRT521227)
- hsa-mir-302a-3p (MIRT521228)
- hsa-mir-129-5p (MIRT622342)
- hsa-mir-3680-3p (MIRT622343)
- hsa-mir-557 (MIRT622344)
- hsa-mir-507 (MIRT622345)
- hsa-mir-6516-5p (MIRT622346)
- hsa-mir-455-3p (MIRT622347)
- hsa-mir-4524a-3p (MIRT622348)
- hsa-mir-4328 (MIRT622349)
- hsa-mir-5698 (MIRT666476)
- hsa-mir-744-3p (MIRT666477)
- hsa-mir-4674 (MIRT666478)
- hsa-mir-4423-5p (MIRT666479)
- hsa-mir-6501-5p (MIRT666480)
- hsa-mir-143-5p (MIRT666481)
- hsa-mir-4437 (MIRT666482)
- hsa-mir-4430 (MIRT666483)
- hsa-mir-3652 (MIRT666484)
- hsa-mir-4634 (MIRT666485)
- hsa-mir-122-5p (MIRT666486)
- hsa-mir-504-3p (MIRT666487)
- hsa-mir-3135b (MIRT666488)
- hsa-mir-6499-3p (MIRT666489)
- hsa-mir-367-5p (MIRT666490)
- hsa-mir-1267 (MIRT666491)
- hsa-mir-378g (MIRT666492)
- hsa-mir-4486 (MIRT666493)
- hsa-mir-6860 (MIRT666494)
- hsa-mir-612 (MIRT666495)
- hsa-mir-5189-5p (MIRT666496)
- hsa-mir-3187-5p (MIRT666497)
- hsa-mir-1285-3p (MIRT666498)
- hsa-mir-5693 (MIRT666499)
- hsa-mir-1298-3p (MIRT666500)
- hsa-mir-1184 (MIRT735900)
- hsa-mir-1205 (MIRT735990)
- hsa-mir-1207-5p (MIRT736056)
- hsa-mir-127-5p (MIRT736948)
- hsa-mir-17-3p (MIRT738007)
- hsa-mir-1909-3p (MIRT738375)
- hsa-mir-1914-3p (MIRT738522)
- hsa-mir-3154 (MIRT740422)
- hsa-mir-3158-5p (MIRT740482)
- hsa-mir-3173-3p (MIRT740620)
- hsa-mir-3179 (MIRT740752)
- hsa-mir-3942-5p (MIRT743158)
- hsa-mir-4270 (MIRT743594)
- hsa-mir-4271 (MIRT743638)
- hsa-mir-4434 (MIRT744411)
- hsa-mir-4436b-3p (MIRT744477)
- hsa-mir-4441 (MIRT744561)
- hsa-mir-4516 (MIRT745764)
- hsa-mir-4527 (MIRT745952)
- hsa-mir-4533 (MIRT746031)
- hsa-mir-4632-5p (MIRT746286)
- hsa-mir-4685-5p (MIRT746973)
- hsa-mir-4703-5p (MIRT747311)
- hsa-mir-4725-3p (MIRT747719)
- hsa-mir-4747-5p (MIRT748276)
- hsa-mir-4763-3p (MIRT748564)
- hsa-mir-4779 (MIRT748763)
- hsa-mir-5194 (MIRT749986)
- hsa-mir-5196-5p (MIRT750060)
- hsa-mir-5703 (MIRT751367)
- hsa-mir-6132 (MIRT752333)
- hsa-mir-6503-5p (MIRT752920)
- hsa-mir-6721-5p (MIRT753835)
- hsa-mir-6722-3p (MIRT753888)
- hsa-mir-6735-5p (MIRT754189)
- hsa-mir-6738-5p (MIRT754281)
- hsa-mir-6754-5p (MIRT754736)
- hsa-mir-6760-5p (MIRT754942)
- hsa-mir-6770-5p (MIRT755293)
- hsa-mir-6780b-5p (MIRT755650)
- hsa-mir-6783-5p (MIRT755761)
- hsa-mir-6823-5p (MIRT756928)
- hsa-mir-6836-5p (MIRT757227)
- hsa-mir-6837-5p (MIRT757255)
- hsa-mir-6878-5p (MIRT758225)
- hsa-mir-6879-5p (MIRT758278)
- hsa-mir-6891-5p (MIRT758679)
- hsa-mir-7843-3p (MIRT759750)
- hsa-mir-7843-5p (MIRT759778)
miRNA Products
Inhibitory RNA Products
- Origene sirna, shrna, and RNAi products in human, mouse, rat for SBNO1
- Browse OriGene Inhibitory RNA Products For SBNO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SBNO1
- genomics-online: shRNA clones - Search results for available SBNO1 gene related products
Clone Products
- Sino Biological Human cDNA Clone for SBNO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SBNO1
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
- orf clones - Search results for available SBNO1 gene related products
- Applied Biological Materials (abm): Clones for SBNO1 - Select products 50% OFF >
- * SBNO1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * SBNO1 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
Cell Line Products
-
Horizon Cell Lines for SBNO1
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for SBNO1 Gene
Localization for SBNO1 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 0 |
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005575 | cellular_component | ND | -- |
| GO:0005634 | nucleus | IBA | 21873635 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot for SBNO1 Gene
Pathways & Interactions for SBNO1 Gene
Interacting Proteins for SBNO1 Gene
GPS-Prot Interaction Network for SBNO1
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
| GO:0008150 | biological_process | ND | -- |
No data available for Pathways by source and SIGNOR curated interactions for SBNO1 Gene
Transcripts for SBNO1 Gene
mRNA/cDNA for SBNO1 Gene
- (2) REFSEQ mRNAs :
- (15) Additional mRNA sequences :
- (218) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000267176 11121 bps (ENST00000267176.8)
- ENST00000420886 10981 bps (ENST00000420886.6)
- ENST00000602398 11128 bps (ENST00000602398.2)
CRISPR Products
-
OriGene CRISPR knockouts for SBNO1
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SBNO1
- genomics-online: gRNA clones - Search results for available SBNO1 gene related products
- Applied Biological Materials (abm): CRISPR Clones for SBNO1 - Select products 50% OFF >
- * SBNO1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * SBNO1 CRISPR applications: KO, Activation, Repression, and more - Browse All
-
Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
miRNA Products
Inhibitory RNA Products
- Origene sirna, shrna, and RNAi products in human, mouse, rat for SBNO1
- Browse OriGene Inhibitory RNA Products For SBNO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SBNO1
- genomics-online: shRNA clones - Search results for available SBNO1 gene related products
Clone Products
- Sino Biological Human cDNA Clone for SBNO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SBNO1
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
- orf clones - Search results for available SBNO1 gene related products
- Applied Biological Materials (abm): Clones for SBNO1 - Select products 50% OFF >
- * SBNO1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * SBNO1 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13a | · | 13b | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21 | ^ | 22 | ^ | 23 | ^ | 24 | ^ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP2: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP3: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP4: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP5: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP6: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - |
| ExUns: | 25 | ^ | 26 | ^ | 27 | ^ | 28 | ^ | 29 | ^ | 30 | ^ | 31 | ^ | 32 | ^ | 33 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||
| SP2: | |||||||||||||||||
| SP3: | - | ||||||||||||||||
| SP4: | |||||||||||||||||
| SP5: | |||||||||||||||||
| SP6: | |||||||||||||||||
| SP7: |
Expression for SBNO1 Gene
This gene is overexpressed in Testis (28.8), Peripheral blood mononuclear cells (8.7), and Fetal ovary (6.8).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for SBNO1 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of SBNO1 Gene:
SBNO1SOURCE GeneReport for Unigene cluster for SBNO1 Gene:
Hs.7012Evidence on tissue expression from TISSUES for SBNO1 Gene
- Blood(4.1)
- Nervous system(3.4)
Primer Products
-
OriGene qPCR primer pairs for SBNO1
-
OriGene qPCR primer pairs and template standards for SBNO1
- genomics-online: primer clones - Search results for available SBNO1 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for SBNO1 Gene
Orthologs for SBNO1 Gene
This gene was present in the common ancestor of eukaryotes.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | SBNO1 33 32 |
|
OneToOne | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 33 |
|
OneToMany | |
| -- 33 |
|
OneToMany | |||
| -- 33 |
|
OneToMany | |||
| -- 33 |
|
OneToMany | |||
| dog (Canis familiaris) |
Mammalia | SBNO1 33 32 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | SBNO1 33 32 |
|
OneToOne | |
| rat (Rattus norvegicus) |
Mammalia | Sbno1 32 |
|
||
| mouse (Mus musculus) |
Mammalia | Sbno1 17 33 32 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | SBNO1 33 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | SBNO1 33 32 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | SBNO1 33 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | sbno1 32 |
|
||
| Str.16725 32 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | Xl.19331 32 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | sbno1 32 |
|
||
| SBNO1 33 |
|
OneToOne | |||
| Dr.25585 32 |
|
||||
| rainbow trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.13697 32 |
|
||
| fruit fly (Drosophila melanogaster) |
Insecta | sno 33 32 |
|
ManyToMany | |
| CG3491 33 |
|
ManyToMany | |||
| African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP011199 32 |
|
||
| worm (Caenorhabditis elegans) |
Secernentea | let-765 33 32 |
|
OneToMany | |
| thale cress (Arabidopsis thaliana) |
eudicotyledons | EMB1135 32 |
|
||
| rice (Oryza sativa) |
Liliopsida | Os08g0223700 32 |
|
||
| Os.14486 32 |
|
||||
| sea squirt (Ciona savignyi) |
Ascidiacea | CSA.5085 33 |
|
OneToMany | |
| Cin.5929 32 |
|
||||
| sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.5929 32 |
|
- Species where no ortholog for SBNO1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Evolution for SBNO1 Gene
- ENSEMBL:
- Gene Tree for SBNO1 (if available)
- TreeFam:
- Gene Tree for SBNO1 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for SBNO1: view image
Paralogs for SBNO1 Gene
Variants for SBNO1 Gene
| SNP ID | Clin | Chr 12 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs193920847 | uncertain-significance, Malignant tumor of prostate | 123,350,306(-) | T/G | intron_variant | |
| VAR_037910 | A breast cancer sample | p.Thr634Ser | |||
| VAR_037912 | A breast cancer sample | p.Glu889Lys | |||
| VAR_037913 | A breast cancer sample | p.Ser997Cys | |||
| rs1000032716 | -- | 123,298,038(-) | C/T | coding_sequence_variant, missense_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2746502 | CNV | deletion | 23290073 |
| esv2746503 | CNV | deletion | 23290073 |
| esv2746504 | CNV | deletion | 23290073 |
| esv3549920 | CNV | deletion | 23714750 |
| nsv1127301 | CNV | deletion | 24896259 |
| nsv1144662 | CNV | deletion | 24896259 |
| nsv477316 | CNV | novel sequence insertion | 20440878 |
Residual Variation Intolerance Score:
1.95% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
7.13;
80.63% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for SBNO1 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SBNO1 Gene
Disorders for SBNO1 Gene
Additional Disease Information for SBNO1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for SBNO1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SBNO1 Gene
Publications for SBNO1 Gene
- Common variants at 12q15 and 12q24 are associated with infant head circumference. (PMID: 22504419) Taal HR … Jaddoe VWV (Nature genetics 2012) 3 43 56
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 43 56
- Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich TM … Kathiresan S (Nature 2010) 3 43 56
- Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H … Hirschhorn JN (Nature 2010) 3 43 56
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 56
ExternalLinks
Products for SBNO1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- OriGene Purified Proteins for SBNO1
- Search Origene for MassSpec and Protein Over-expression Lysates for SBNO1
- Origene Custom Protein Services for SBNO1
- Origene sirna, shrna, and RNAi products in human, mouse, rat for SBNO1
- Browse OriGene Inhibitory RNA Products For SBNO1
- OriGene qPCR primer pairs for SBNO1
- OriGene qPCR primer pairs and template standards for SBNO1
- OriGene CRISPR knockouts for SBNO1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SBNO1
- Sino Biological Human cDNA Clone for SBNO1
- Browse Sino Biological Recombinant Proteins
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- Epitope Tag Antibodies & Reporter Protein Antibodies
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- Novus Biologicals proteins and lysates for SBNO1
- Browse Antibodies
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- Invitrogen Antibodies for SBNO1 (AFLGC-SBNO1)
- antibodies-online: Show 14 available SBNO1 Antibodies ranked by validation data
- antibodies-online: Search results for available SBNO1 related products ranked by validation data
- antibodies-online: Search results for available SBNO1 related products ranked by validation data
- Santa Cruz Biotechnology (SCBT) Antibodies for SBNO1
- Search Santa Cruz Biotechnology (SCBT) for SBNO1 siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
- Horizon Cell Lines for SBNO1
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
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- genomics-online: gRNA clones - Search results for available SBNO1 gene related products
- genomics-online: primer clones - Search results for available SBNO1 gene related products
- genomics-online: shRNA clones - Search results for available SBNO1 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for SBNO1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for SBNO1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SBNO1
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for SBNO1
- Biorbyt antibodies for SBNO1
Sources for SBNO1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
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- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
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- (40) dbSNP
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- (44) BGMUT
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- (46) Atlas
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- (48) H-invDB
- (49) HORDE
- (50) HUGE
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- (55) OriGene
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- (58) TGDB
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- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
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- (112) Disease Ontology
- (113) Genetics Home Reference
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- (115) MedlinePlus
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- (118) NCBI Bookshelf
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- (142) DataMed
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- (144) genomics-online
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- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
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- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
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- (165) Bio Basic
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