Aliases for SBNO1 Gene
Aliases for SBNO1 Gene
External Ids for SBNO1 Gene
- HGNC: 22973
- Entrez Gene: 55206
- Ensembl: ENSG00000139697
- OMIM: 614274
- UniProtKB: A3KN83
Previous GeneCards Identifiers for SBNO1 Gene
- GC12M123587
- GC12M122216
- GC12M122217
- GC12M122305
- GC12M123780
- GC12M120734
- GC12M123774
Summaries for SBNO1 Gene
GeneCards Summary for SBNO1 Gene
SBNO1 (Strawberry Notch Homolog 1) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include oxidoreductase activity and hydrolase activity. An important paralog of this gene is SBNO2.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SBNO1 Gene
Genomics for SBNO1 Gene
GeneHancer (GH) Regulatory Elements for SBNO1 Gene
Promoters and enhancers for SBNO1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SBNO1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SBNO1 Gene
Genomic Locations for SBNO1 Gene
- chr12:123,289,109-123,365,525
- (GRCh38/hg38)
- Size:
- 76,417 bases
- Orientation:
- Minus strand
- chr12:123,773,656-123,849,390
- (GRCh37/hg19)
Genomic View for SBNO1 Gene
Genes around SBNO1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12q24.31 by Ensembl
- 12q24.31 by Entrez Gene
- 12q24.31 by HGNC
SBNO1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SBNO1 Gene
Proteins for SBNO1 Gene
-
Protein details for SBNO1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A3KN83-SBNO1_HUMAN
- Recommended name:
- Protein strawberry notch homolog 1
- Protein Accession:
- A3KN83
- Q05C06
- Q3ZTS3
- Q9H3T8
- Q9NVB2
Protein attributes for SBNO1 Gene
- Size:
- 1393 amino acids
- Molecular mass:
- 154312 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=AAQ76814.1; Type=Erroneous initiation; Evidence={ECO:0000305};
Protein Expression for SBNO1 Gene
Post-translational modifications for SBNO1 Gene
Other Protein References for SBNO1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for SBNO1
-
Abcam antibodies for SBNO1
- Invitrogen Antibodies for SBNO1
- Search GeneTex for Antibodies for SBNO1
-
Santa Cruz Biotechnology (SCBT) Antibodies for SBNO1
Protein Products
-
OriGene Purified Proteins for SBNO1
- Search Origene for MassSpec and Protein Over-expression Lysates for SBNO1
- Origene Custom Protein Services for SBNO1
- Search GeneTex for Proteins for SBNO1
-
Abcam proteins for SBNO1
Assay Products
No data available for DME Specific Peptides for SBNO1 Gene
Domains & Families for SBNO1 Gene
Gene Families for SBNO1 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for SBNO1 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for SBNO1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
A3KN83- Family:
-
- Belongs to the SBNO family.
Function for SBNO1 Gene
Phenotypes From GWAS Catalog for SBNO1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003674 | molecular_function | ND | -- |
Phenotypes for SBNO1 Gene
- GenomeRNAi human phenotypes for SBNO1:
-
- Increased vaccinia virus (VACV) infection
- Decreased hepcidin::fluc mRNA expression
- Lamellipodia cells
- Decreased ionizing radiation sensitivity
- Decreased shRNA abundance (Z-score < -2)
- Decreased NF-kappaB reporter expression
- Resistant to vaccinia virus (VACV-A4L) infection
- Increased shRNA abundance (Z-score > 2)
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SBNO1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for SBNO1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for SBNO1 gene
- Search ViGene Biosciences for SBNO1
CRISPR Products
-
OriGene CRISPR knockouts for SBNO1
- genomics-online: gRNA clones - Search results for available SBNO1 gene related products
- Applied Biological Materials CRISPR for SBNO1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
- GenScript: Design CRISPR guide RNA sequences for SBNO1
miRNA for SBNO1 Gene
- miRTarBase miRNAs that target SBNO1
-
- hsa-mir-188-5p (MIRT044901)
- hsa-mir-218-5p (MIRT046997)
- hsa-mir-196a-5p (MIRT048283)
- hsa-mir-450b-5p (MIRT184667)
- hsa-mir-153-5p (MIRT184693)
- hsa-mir-4659a-5p (MIRT270702)
- hsa-mir-4659b-5p (MIRT270703)
- hsa-mir-5590-5p (MIRT270705)
- hsa-mir-4776-3p (MIRT510814)
- hsa-mir-6848-3p (MIRT510815)
- hsa-mir-6843-3p (MIRT510816)
- hsa-mir-4776-5p (MIRT510817)
- hsa-mir-19b-2-5p (MIRT510818)
- hsa-mir-19b-1-5p (MIRT510819)
- hsa-mir-19a-5p (MIRT510820)
- hsa-mir-4800-5p (MIRT510821)
- hsa-mir-3138 (MIRT510822)
- hsa-mir-3619-3p (MIRT510823)
- hsa-mir-3663-5p (MIRT510824)
- hsa-mir-6131 (MIRT510825)
- hsa-mir-4657 (MIRT510826)
- hsa-mir-4491 (MIRT510827)
- hsa-mir-1911-3p (MIRT510828)
- hsa-mir-374b-3p (MIRT521188)
- hsa-mir-4524b-5p (MIRT521189)
- hsa-mir-4524a-5p (MIRT521190)
- hsa-mir-922 (MIRT521191)
- hsa-mir-646 (MIRT521192)
- hsa-mir-503-5p (MIRT521193)
- hsa-mir-32-3p (MIRT521194)
- hsa-mir-548av-3p (MIRT521195)
- hsa-mir-548f-3p (MIRT521196)
- hsa-mir-548e-3p (MIRT521197)
- hsa-mir-548az-3p (MIRT521198)
- hsa-mir-548ar-3p (MIRT521199)
- hsa-mir-548a-3p (MIRT521200)
- hsa-mir-15b-5p (MIRT521201)
- hsa-mir-497-5p (MIRT521202)
- hsa-mir-424-5p (MIRT521203)
- hsa-mir-195-5p (MIRT521204)
- hsa-mir-6838-5p (MIRT521205)
- hsa-mir-16-5p (MIRT521206)
- hsa-mir-15a-5p (MIRT521207)
- hsa-mir-8073 (MIRT521208)
- hsa-mir-221-5p (MIRT521209)
- hsa-mir-5089-5p (MIRT521210)
- hsa-mir-6807-5p (MIRT521211)
- hsa-mir-5589-5p (MIRT521212)
- hsa-mir-4731-5p (MIRT521213)
- hsa-mir-6506-5p (MIRT521214)
- hsa-mir-619-5p (MIRT521215)
- hsa-mir-4433b-3p (MIRT521216)
- hsa-mir-302b-3p (MIRT521217)
- hsa-mir-302c-3p (MIRT521218)
- hsa-mir-520d-3p (MIRT521219)
- hsa-mir-302d-3p (MIRT521220)
- hsa-mir-302e (MIRT521221)
- hsa-mir-520b (MIRT521222)
- hsa-mir-372-3p (MIRT521223)
- hsa-mir-520e (MIRT521224)
- hsa-mir-520c-3p (MIRT521225)
- hsa-mir-373-3p (MIRT521226)
- hsa-mir-520a-3p (MIRT521227)
- hsa-mir-302a-3p (MIRT521228)
- hsa-mir-129-5p (MIRT622342)
- hsa-mir-3680-3p (MIRT622343)
- hsa-mir-557 (MIRT622344)
- hsa-mir-507 (MIRT622345)
- hsa-mir-6516-5p (MIRT622346)
- hsa-mir-455-3p (MIRT622347)
- hsa-mir-4524a-3p (MIRT622348)
- hsa-mir-4328 (MIRT622349)
- hsa-mir-5698 (MIRT666476)
- hsa-mir-744-3p (MIRT666477)
- hsa-mir-4674 (MIRT666478)
- hsa-mir-4423-5p (MIRT666479)
- hsa-mir-6501-5p (MIRT666480)
- hsa-mir-143-5p (MIRT666481)
- hsa-mir-4437 (MIRT666482)
- hsa-mir-4430 (MIRT666483)
- hsa-mir-3652 (MIRT666484)
- hsa-mir-4634 (MIRT666485)
- hsa-mir-122-5p (MIRT666486)
- hsa-mir-504-3p (MIRT666487)
- hsa-mir-3135b (MIRT666488)
- hsa-mir-6499-3p (MIRT666489)
- hsa-mir-367-5p (MIRT666490)
- hsa-mir-1267 (MIRT666491)
- hsa-mir-378g (MIRT666492)
- hsa-mir-4486 (MIRT666493)
- hsa-mir-6860 (MIRT666494)
- hsa-mir-612 (MIRT666495)
- hsa-mir-5189-5p (MIRT666496)
- hsa-mir-3187-5p (MIRT666497)
- hsa-mir-1285-3p (MIRT666498)
- hsa-mir-5693 (MIRT666499)
- hsa-mir-1298-3p (MIRT666500)
- hsa-mir-1184 (MIRT735900)
- hsa-mir-1205 (MIRT735990)
- hsa-mir-1207-5p (MIRT736056)
- hsa-mir-127-5p (MIRT736948)
- hsa-mir-17-3p (MIRT738007)
- hsa-mir-1909-3p (MIRT738375)
- hsa-mir-1914-3p (MIRT738522)
- hsa-mir-3154 (MIRT740422)
- hsa-mir-3158-5p (MIRT740482)
- hsa-mir-3173-3p (MIRT740620)
- hsa-mir-3179 (MIRT740752)
- hsa-mir-3942-5p (MIRT743158)
- hsa-mir-4270 (MIRT743594)
- hsa-mir-4271 (MIRT743638)
- hsa-mir-4434 (MIRT744411)
- hsa-mir-4436b-3p (MIRT744477)
- hsa-mir-4441 (MIRT744561)
- hsa-mir-4516 (MIRT745764)
- hsa-mir-4527 (MIRT745952)
- hsa-mir-4533 (MIRT746031)
- hsa-mir-4632-5p (MIRT746286)
- hsa-mir-4685-5p (MIRT746973)
- hsa-mir-4703-5p (MIRT747311)
- hsa-mir-4725-3p (MIRT747719)
- hsa-mir-4747-5p (MIRT748276)
- hsa-mir-4763-3p (MIRT748564)
- hsa-mir-4779 (MIRT748763)
- hsa-mir-5194 (MIRT749986)
- hsa-mir-5196-5p (MIRT750060)
- hsa-mir-5703 (MIRT751367)
- hsa-mir-6132 (MIRT752333)
- hsa-mir-6503-5p (MIRT752920)
- hsa-mir-6721-5p (MIRT753835)
- hsa-mir-6722-3p (MIRT753888)
- hsa-mir-6735-5p (MIRT754189)
- hsa-mir-6738-5p (MIRT754281)
- hsa-mir-6754-5p (MIRT754736)
- hsa-mir-6760-5p (MIRT754942)
- hsa-mir-6770-5p (MIRT755293)
- hsa-mir-6780b-5p (MIRT755650)
- hsa-mir-6783-5p (MIRT755761)
- hsa-mir-6823-5p (MIRT756928)
- hsa-mir-6836-5p (MIRT757227)
- hsa-mir-6837-5p (MIRT757255)
- hsa-mir-6878-5p (MIRT758225)
- hsa-mir-6879-5p (MIRT758278)
- hsa-mir-6891-5p (MIRT758679)
- hsa-mir-7843-3p (MIRT759750)
- hsa-mir-7843-5p (MIRT759778)
miRNA Products
- Search ViGene Biosciences for SBNO1
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for SBNO1
- Browse OriGene Inhibitory RNA Products For SBNO1
- genomics-online: shRNA clones - Search results for available SBNO1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for SBNO1 gene
Clone Products
- VectorBuilder custom plasmid, inducible vectors for SBNO1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SBNO1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
- orf clones - Search results for available SBNO1 gene related products
- Applied Biological Materials Clones for SBNO1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for SBNO1
-
ViGene Biosciences adenoviral particle packaged cDNA for SBNO1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for SBNO1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for SBNO1 gene
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SBNO1 Gene
Localization for SBNO1 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 4 |
| cytosol | 1 |
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005575 | cellular_component | ND | -- |
No data available for Subcellular locations from UniProtKB/Swiss-Prot for SBNO1 Gene
Pathways & Interactions for SBNO1 Gene
No Data Available
Interacting Proteins for SBNO1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
| GO:0008150 | biological_process | ND | -- |
No data available for Pathways by source and SIGNOR curated interactions for SBNO1 Gene
Transcripts for SBNO1 Gene
mRNA/cDNA for SBNO1 Gene
- (15) REFSEQ mRNAs :
- (14) Additional mRNA sequences :
- (218) Selected AceView cDNA sequences:
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for SBNO1 Gene
- Strawberry notch homolog 1 (Drosophila):
- Representative Sequences:
CRISPR Products
-
OriGene CRISPR knockouts for SBNO1
- genomics-online: gRNA clones - Search results for available SBNO1 gene related products
- Applied Biological Materials CRISPR for SBNO1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
- GenScript: Design CRISPR guide RNA sequences for SBNO1
miRNA Products
- Search ViGene Biosciences for SBNO1
Inhibitory RNA Products
- Origene RNAi, sirna, and shrna products in human, mouse, rat for SBNO1
- Browse OriGene Inhibitory RNA Products For SBNO1
- genomics-online: shRNA clones - Search results for available SBNO1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for SBNO1 gene
Clone Products
- VectorBuilder custom plasmid, inducible vectors for SBNO1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SBNO1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
- orf clones - Search results for available SBNO1 gene related products
- Applied Biological Materials Clones for SBNO1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13a | · | 13b | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21 | ^ | 22 | ^ | 23 | ^ | 24 | ^ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP2: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP3: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP4: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP5: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP6: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - |
| ExUns: | 25 | ^ | 26 | ^ | 27 | ^ | 28 | ^ | 29 | ^ | 30 | ^ | 31 | ^ | 32 | ^ | 33 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||
| SP2: | |||||||||||||||||
| SP3: | - | ||||||||||||||||
| SP4: | |||||||||||||||||
| SP5: | |||||||||||||||||
| SP6: | |||||||||||||||||
| SP7: |
Expression for SBNO1 Gene
This gene is overexpressed in Testis (28.8), Peripheral blood mononuclear cells (8.7), and Fetal ovary (6.8).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for SBNO1 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of SBNO1 Gene:
SBNO1SOURCE GeneReport for Unigene cluster for SBNO1 Gene:
Hs.7012Evidence on tissue expression from TISSUES for SBNO1 Gene
- Blood(4.1)
- Nervous system(3.4)
Primer Products
-
OriGene qPCR primer pairs for SBNO1
-
OriGene qPCR primer pairs and template standards for SBNO1
- genomics-online: primer clones - Search results for available SBNO1 gene related products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for SBNO1 Gene
Orthologs for SBNO1 Gene
This gene was present in the common ancestor of eukaryotes.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | SBNO1 33 34 |
|
||
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 34 |
|
OneToMany | |
| -- 34 |
|
OneToMany | |||
| -- 34 |
|
OneToMany | |||
| -- 34 |
|
OneToMany | |||
| dog (Canis familiaris) |
Mammalia | SBNO1 33 34 |
|
||
| cow (Bos Taurus) |
Mammalia | SBNO1 33 34 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Sbno1 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Sbno1 33 16 34 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | SBNO1 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | SBNO1 33 34 |
|
||
| lizard (Anolis carolinensis) |
Reptilia | SBNO1 34 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | sbno1 33 |
|
||
| Str.16725 33 |
|
||||
| African clawed frog (Xenopus laevis) |
Amphibia | Xl.19331 33 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | sbno1 33 |
|
||
| SBNO1 34 |
|
OneToOne | |||
| Dr.25585 33 |
|
||||
| rainbow trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.13697 33 |
|
||
| fruit fly (Drosophila melanogaster) |
Insecta | sno 33 34 |
|
||
| CG3491 34 |
|
ManyToMany | |||
| African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP011199 33 |
|
||
| worm (Caenorhabditis elegans) |
Secernentea | let-765 33 34 |
|
||
| thale cress (Arabidopsis thaliana) |
eudicotyledons | EMB1135 33 |
|
||
| rice (Oryza sativa) |
Liliopsida | Os08g0223700 33 |
|
||
| Os.14486 33 |
|
||||
| sea squirt (Ciona savignyi) |
Ascidiacea | CSA.5085 34 |
|
OneToMany | |
| sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.5929 33 |
|
- Species where no ortholog for SBNO1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Paralogs for SBNO1 Gene
(1) SIMAP similar genes for SBNO1 Gene using alignment to 1 proteins:
Variants for SBNO1 Gene
| SNP ID | Clin | Chr 12 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs193920847 | uncertain-significance, Malignant tumor of prostate | 123,350,306(-) | T/G | intron_variant | |
| VAR_037910 | A breast cancer sample | p.Thr634Ser | |||
| VAR_037912 | A breast cancer sample | p.Glu889Lys | |||
| VAR_037913 | A breast cancer sample | p.Ser997Cys | |||
| rs1000032716 | -- | 123,298,038(-) | C/T | coding_sequence_variant, missense_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2746502 | CNV | deletion | 23290073 |
| esv2746503 | CNV | deletion | 23290073 |
| esv2746504 | CNV | deletion | 23290073 |
| esv3549920 | CNV | deletion | 23714750 |
| nsv1127301 | CNV | deletion | 24896259 |
| nsv1144662 | CNV | deletion | 24896259 |
| nsv477316 | CNV | novel sequence insertion | 20440878 |
Residual Variation Intolerance Score:
1.95% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
7.13;
80.63% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for SBNO1 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SBNO1 Gene
Disorders for SBNO1 Gene
Additional Disease Information for SBNO1
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
No disorders were found for SBNO1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SBNO1 Gene
Publications for SBNO1 Gene
- Common variants at 12q15 and 12q24 are associated with infant head circumference. (PMID: 22504419) Taal HR … Jaddoe VWV (Nature genetics 2012) 3 44 58
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 44 58
- Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich TM … Kathiresan S (Nature 2010) 3 44 58
- Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H … Hirschhorn JN (Nature 2010) 3 44 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
Products for SBNO1 Gene
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- Cloud-Clone Corp. disease models service
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SBNO1
- VectorBuilder custom plasmid, inducible vectors for SBNO1
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- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available SBNO1 related products ranked by validation data
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- Search GeneTex for Antibodies for SBNO1
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- ViGene Biosciences adenoviral particle packaged cDNA for SBNO1 gene
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- Search ViGene Biosciences for SBNO1
- Santa Cruz Biotechnology (SCBT) Antibodies for SBNO1
- Search Santa Cruz Biotechnology (SCBT) for SBNO1 siRNA/shRNA
- Santa Cruz Biotechnology (SCBT) CRISPR for SBNO1
- Horizon Cell Lines for SBNO1
- genomics-online: cdna clones - Search results for available SBNO1 gene related products
- orf clones - Search results for available SBNO1 gene related products
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- genomics-online: primer clones - Search results for available SBNO1 gene related products
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Sources for SBNO1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
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- (123) CDC
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- (125) NCBI Bookshelf
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- (128) ViGene Biosciences
- (129) HPO
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- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems