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Aliases for SAMD11P1 Gene

Aliases for SAMD11P1 Gene

  • Sterile Alpha Motif Domain Containing 11 Pseudogene 1 2 3 5

External Ids for SAMD11P1 Gene

Previous GeneCards Identifiers for SAMD11P1 Gene

  • GC17M002517

Summaries for SAMD11P1 Gene

GeneCards Summary for SAMD11P1 Gene

SAMD11P1 (Sterile Alpha Motif Domain Containing 11 Pseudogene 1) is a Pseudogene.

Additional gene information for SAMD11P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SAMD11P1 Gene

Genomics for SAMD11P1 Gene

GeneHancer (GH) Regulatory Elements for SAMD11P1 Gene

Promoters and enhancers for SAMD11P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I002623 Enhancer 1 Ensembl ENCODE 0.4 -10.4 -10440 1.6 HDAC1 PKNOX1 ZBTB40 TCF12 ZNF766 SCRT2 ETV6 ATF7 IKZF2 ZBTB2 METTL16 LOC105371490 SAMD11P1 ENSG00000279432 PAFAH1B1
GH17I002633 Enhancer 0.9 ENCODE 0.3 -20.7 -20741 2 ZNF133 INSM2 FEZF1 RAD21 ZNF335 ZNF121 POLR3A ZNF366 ZSCAN5C SCRT2 DPH1 METTL16 CLUH ENSG00000263345 LOC105371490 ENSG00000279432 SAMD11P1 PAFAH1B1
GH17I002630 Enhancer 0.6 Ensembl ENCODE 0.4 -17.4 -17365 1.1 GLIS1 ZIC2 METTL16 CLUH ENSG00000279432 SAMD11P1 PAFAH1B1
GH17I002635 Enhancer 0.2 ENCODE 0.3 -21.9 -21893 0.2 ENSG00000279432 SAMD11P1 PAFAH1B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SAMD11P1 Gene

Genomic Locations for SAMD11P1 Gene
chr17:2,613,282-2,613,969
(GRCh38/hg38)
Size:
688 bases
Orientation:
Minus strand
chr17:2,516,576-2,517,263
(GRCh37/hg19)

Genomic View for SAMD11P1 Gene

Genes around SAMD11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SAMD11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SAMD11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SAMD11P1 Gene

Proteins for SAMD11P1 Gene

Post-translational modifications for SAMD11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SAMD11P1 Gene

Domains & Families for SAMD11P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SAMD11P1 Gene

Function for SAMD11P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SAMD11P1 Gene

Localization for SAMD11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SAMD11P1 Gene

Pathways & Interactions for SAMD11P1 Gene

SuperPathways for SAMD11P1 Gene

No Data Available

Interacting Proteins for SAMD11P1 Gene

Gene Ontology (GO) - Biological Process for SAMD11P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SAMD11P1 Gene

Drugs & Compounds for SAMD11P1 Gene

No Compound Related Data Available

Transcripts for SAMD11P1 Gene

mRNA/cDNA for SAMD11P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SAMD11P1 Gene

No ASD Table

Relevant External Links for SAMD11P1 Gene

GeneLoc Exon Structure for
SAMD11P1
ECgene alternative splicing isoforms for
SAMD11P1

Expression for SAMD11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SAMD11P1 Gene

mRNA differential expression in normal tissues according to GTEx for SAMD11P1 Gene

This gene is overexpressed in Testis (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of SAMD11P1 Gene:

SAMD11P1
genes like me logo Genes that share expression patterns with SAMD11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SAMD11P1 Gene

Orthologs for SAMD11P1 Gene

Evolution for SAMD11P1 Gene

ENSEMBL:
Gene Tree for SAMD11P1 (if available)
TreeFam:
Gene Tree for SAMD11P1 (if available)

No data available for Orthologs for SAMD11P1 Gene

Paralogs for SAMD11P1 Gene

No data available for Paralogs for SAMD11P1 Gene

Variants for SAMD11P1 Gene

Additional Variant Information for SAMD11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SAMD11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SAMD11P1 Gene

Disorders for SAMD11P1 Gene

No disorders were found for SAMD11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SAMD11P1 Gene

Publications for SAMD11P1 Gene

No publications were found for SAMD11P1 Gene.

Products for SAMD11P1 Gene

Sources for SAMD11P1 Gene

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