Aliases for RYKP1 Gene

Aliases for RYKP1 Gene

  • RYK Pseudogene 1 2 3 5
  • RYK Receptor-Like Tyrosine Kinase Pseudogene 1 2 3
  • Receptor-Like Tyrosine Kinase Pseudogene 1 2 3
  • RYK Receptor-Like Tyrosine Kinase-Like 1 2 3
  • JTK5B Protein Tyrosine Kinase 2 3
  • RYK Receptor-Like Tyrosine Kinase Pseudogene 2
  • JTK5B 3
  • RYKL1 3
  • JTK5 3
  • RYKP 3

External Ids for RYKP1 Gene

Previous HGNC Symbols for RYKP1 Gene

  • RYKL1
  • JTK5B
  • RYKP

Previous GeneCards Identifiers for RYKP1 Gene

  • GC17P004125

Summaries for RYKP1 Gene

GeneCards Summary for RYKP1 Gene

RYKP1 (RYK Pseudogene 1) is a Pseudogene.

Additional gene information for RYKP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RYKP1 Gene

Genomics for RYKP1 Gene

GeneHancer (GH) Regulatory Elements for RYKP1 Gene

Promoters and enhancers for RYKP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J004219 Enhancer 1.1 Ensembl ENCODE dbSUPER 750.6 -1.4 -1365 2.2 LCORL NR2F1 NR2F6 SP1 CEBPG ZSCAN21 PRDM1 CEBPA RXRA GATAD2A RYKP1 SHPK ANKFY1 CYB5D2 piR-38580-112 lnc-HASPIN-2
GH17J004222 Enhancer 0.6 FANTOM5 dbSUPER 750.6 +0.3 289 0.3 SP1 RXRA HNF4A HNF4G RYKP1 CYB5D2 piR-43105-255 ANKFY1 lnc-HASPIN-2
GH17J004215 Enhancer 1 ENCODE dbSUPER 0.4 -6.2 -6220 1.3 SP1 CTCF MIXL1 ZNF362 CC2D1A RAD21 ZNF384 SP7 ZBTB33 PKNOX1 ANKFY1 CTNS CAMKK1 ZZEF1 CYB5D2 piR-38580-112 RYKP1 lnc-HASPIN-2
GH17J004217 Enhancer 0.6 Ensembl dbSUPER 0.6 -4.4 -4365 0.2 MAFK ZNF316 NFE2 MAFG EMSY ANKFY1 CYB5D2 RYKP1 piR-38580-112 lnc-HASPIN-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RYKP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RYKP1 Gene

Genomic Locations for RYKP1 Gene
chr17:4,222,066-4,225,054
(GRCh38/hg38)
Size:
2,989 bases
Orientation:
Plus strand
chr17:4,125,361-4,128,349
(GRCh37/hg19)
Size:
2,989 bases
Orientation:
Plus strand

Genomic View for RYKP1 Gene

Genes around RYKP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RYKP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RYKP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RYKP1 Gene

Proteins for RYKP1 Gene

No data available for DME Specific Peptides for RYKP1 Gene

Domains & Families for RYKP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RYKP1 Gene

Function for RYKP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RYKP1 Gene

Localization for RYKP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RYKP1 Gene

Pathways & Interactions for RYKP1 Gene

PathCards logo

SuperPathways for RYKP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RYKP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RYKP1 Gene

Drugs & Compounds for RYKP1 Gene

No Compound Related Data Available

Transcripts for RYKP1 Gene

mRNA/cDNA for RYKP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RYKP1 Gene

No ASD Table

Relevant External Links for RYKP1 Gene

GeneLoc Exon Structure for
RYKP1
ECgene alternative splicing isoforms for
RYKP1

Expression for RYKP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RYKP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RYKP1 Gene:

RYKP1
genes like me logo Genes that share expression patterns with RYKP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RYKP1 Gene

Orthologs for RYKP1 Gene

Evolution for RYKP1 Gene

ENSEMBL:
Gene Tree for RYKP1 (if available)
TreeFam:
Gene Tree for RYKP1 (if available)

No data available for Orthologs for RYKP1 Gene

Paralogs for RYKP1 Gene

No data available for Paralogs for RYKP1 Gene

Variants for RYKP1 Gene

Additional Variant Information for RYKP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RYKP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RYKP1 Gene

Disorders for RYKP1 Gene

No disorders were found for RYKP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RYKP1 Gene

Publications for RYKP1 Gene

  1. Genomic structure and expression of the mouse growth factor receptor related to tyrosine kinases (Ryk). (PMID: 10066802) Halford MM … Stacker SA (The Journal of biological chemistry 1999) 2 3 56
  2. Molecular cloning and chromosomal localisation of the human homologue of a receptor related to tyrosine kinases (RYK). (PMID: 8386829) Stacker SA … Wilks AF (Oncogene 1993) 2 3 56
  3. A survey of protein tyrosine kinase mRNAs expressed in normal human melanocytes. (PMID: 8247543) Lee ST … Spritz RA (Oncogene 1993) 3 56
  4. Putative tyrosine kinases expressed in K-562 human leukemia cells. (PMID: 2247464) Partanen J … Alitalo K (Proceedings of the National Academy of Sciences of the United States of America 1990) 3 56

Products for RYKP1 Gene

Sources for RYKP1 Gene