Aliases for RSL1D1-DT Gene

Data sources for RSL1D1-DT Gene:

Subcategory (RNA class) for RSL1D1-DT Gene

lncRNA

Aliases for RSL1D1-DT Gene

External Ids for RSL1D1-DT Gene

Summaries for RSL1D1-DT Gene

GeneCards Summary for RSL1D1-DT Gene

RSL1D1-DT (RSL1D1 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RSL1D1-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RSL1D1-DT Gene

Genomics for RSL1D1-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RSL1D1-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RSL1D1-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RSL1D1-DT Gene

Latest Assembly
chr16:11,851,586-11,904,647
(GRCh38/hg38)
Size:
53,062 bases
Orientation:
Plus strand

Previous Assembly
chr16:11,945,506-11,989,468
(GRCh37/hg19 by Ensembl)
Size:
43,963 bases
Orientation:
Plus strand

Genomic View for RSL1D1-DT Gene

Genes around RSL1D1-DT on UCSC Golden Path with GeneCards custom track
RSL1D1-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
RSL1D1-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RSL1D1-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RSL1D1-DT Gene

Proteins for RSL1D1-DT Gene

Post-translational modifications for RSL1D1-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for RSL1D1-DT Gene

Domains & Families for RSL1D1-DT Gene

Gene Families for RSL1D1-DT Gene

genes like me logo Genes that share domains with RSL1D1-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RSL1D1-DT Gene

Function for RSL1D1-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RSL1D1-DT Gene

Localization for RSL1D1-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RSL1D1-DT Gene

Pathways & Interactions for RSL1D1-DT Gene

PathCards logo

SuperPathways for RSL1D1-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for RSL1D1-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RSL1D1-DT Gene

Drugs & Compounds for RSL1D1-DT Gene

No Compound Related Data Available

Transcripts for RSL1D1-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RSL1D1-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000027F574_9606 lncRNA 562 3

Ensembl: ENST00000574364 (view in UCSC) ,

LNCipedia: lnc-TNFRSF17-2:1,

NONCODE: NONHSAT140601.2,

URS00008B6764_9606 lncRNA 2104 2

LNCipedia: lnc-TNFRSF17-2:2,

NONCODE: NONHSAT140600.2,

URS0000D5990A_9606 lncRNA 3544 1

LNCipedia: lnc-TNFRSF17-2:4,

URS0001BD83A3_9606 lncRNA 3543 1

LncBook: HSALNT0227786,

URS0001BF453E_9606 lncRNA 3342 1

LncBook: HSALNT0227783,

RSL1D1-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for RSL1D1-DT Gene

No ASD Table

Relevant External Links for RSL1D1-DT Gene

GeneLoc Exon Structure for
RSL1D1-DT

No data available for mRNA/cDNA for RSL1D1-DT Gene

Expression for RSL1D1-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RSL1D1-DT Gene

Orthologs for RSL1D1-DT Gene

Evolution for RSL1D1-DT Gene

ENSEMBL:
Gene Tree for RSL1D1-DT (if available)
TreeFam:
Gene Tree for RSL1D1-DT (if available)

No data available for Orthologs for RSL1D1-DT Gene

Paralogs for RSL1D1-DT Gene

No data available for Paralogs for RSL1D1-DT Gene

Variants for RSL1D1-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for RSL1D1-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for RSL1D1-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RSL1D1-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RSL1D1-DT Gene

Disorders for RSL1D1-DT Gene

No disorders were found for RSL1D1-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RSL1D1-DT Gene

Publications for RSL1D1-DT Gene

No publications were found for RSL1D1-DT Gene.

No data available for Mastermind for RSL1D1-DT Gene

Products for RSL1D1-DT Gene

Sources for RSL1D1-DT Gene