Aliases for RRM1-AS1 Gene

Subcategory (RNA class) for RRM1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for RRM1-AS1 Gene

  • RRM1 Antisense RNA 1 2 3 5
  • RRM1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • RRM1-AS1 2 168
  • NONHSAG007486 92
  • HSALNG0082343 167

External Ids for RRM1-AS1 Gene

Previous GeneCards Identifiers for RRM1-AS1 Gene

  • GC11M004159
  • GC11M004160
  • GC11M004141

Summaries for RRM1-AS1 Gene

GeneCards Summary for RRM1-AS1 Gene

RRM1-AS1 (RRM1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RRM1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RRM1-AS1 Gene

Genomics for RRM1-AS1 Gene

GeneHancer (GH) Regulatory Elements for RRM1-AS1 Gene

Promoters and enhancers for RRM1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J004108 Enhancer 0.2 FANTOM5 11.7 +29.4 29437 0.3 RRM1-AS1 ART1 ART5 C11orf40 OR52I1 OR52K2 OR52K1 OR52M1 RRM1 piR-40176-005
GH11J004145 Enhancer 0.9 Ensembl ENCODE 0.4 -8.0 -7955 1.4 ZBTB11 REST MYC CTBP1 MYNN ZNF592 MNT NR2F1 NCOA2 EP400 OR52K2 RRM1 LINC02749 OR55B1P RRM1-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RRM1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RRM1-AS1 Gene

Genomic Locations for RRM1-AS1 Gene
chr11:4,137,116-4,138,257
(GRCh38/hg38)
Size:
1,142 bases
Orientation:
Minus strand
chr11:4,158,346-4,159,487
(GRCh37/hg19)
Size:
1,142 bases
Orientation:
Minus strand

Genomic View for RRM1-AS1 Gene

Genes around RRM1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RRM1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RRM1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RRM1-AS1 Gene

Proteins for RRM1-AS1 Gene

Post-translational modifications for RRM1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RRM1-AS1 Gene

Domains & Families for RRM1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RRM1-AS1 Gene

Function for RRM1-AS1 Gene

Phenotypes From GWAS Catalog for RRM1-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RRM1-AS1 Gene

Localization for RRM1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RRM1-AS1 Gene

Pathways & Interactions for RRM1-AS1 Gene

PathCards logo

SuperPathways for RRM1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RRM1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RRM1-AS1 Gene

Drugs & Compounds for RRM1-AS1 Gene

No Compound Related Data Available

Transcripts for RRM1-AS1 Gene

mRNA/cDNA for RRM1-AS1 Gene

1 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RRM1-AS1 Gene

No ASD Table

Relevant External Links for RRM1-AS1 Gene

GeneLoc Exon Structure for
RRM1-AS1

Expression for RRM1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RRM1-AS1 Gene

genes like me logo Genes that share expression patterns with RRM1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RRM1-AS1 Gene

Orthologs for RRM1-AS1 Gene

Evolution for RRM1-AS1 Gene

ENSEMBL:
Gene Tree for RRM1-AS1 (if available)
TreeFam:
Gene Tree for RRM1-AS1 (if available)

No data available for Orthologs for RRM1-AS1 Gene

Paralogs for RRM1-AS1 Gene

No data available for Paralogs for RRM1-AS1 Gene

Variants for RRM1-AS1 Gene

Additional Variant Information for RRM1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RRM1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RRM1-AS1 Gene

Disorders for RRM1-AS1 Gene

No disorders were found for RRM1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RRM1-AS1 Gene

Publications for RRM1-AS1 Gene

  1. Generation and analysis of 280,000 human expressed sequence tags. (PMID: 8889549) Hillier LD … Marra M (Genome research 1996) 3 54

Products for RRM1-AS1 Gene

Sources for RRM1-AS1 Gene